Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00962 TTCCCACGCAATCCAATGGACAACATAAGATTCACCGCACCTTTCAGAGTTCAAAAGTTGCTTCTCCAAGTTCCTTTCACCTATCACAGGCAATGGCTGCGCAACTACCCCAAATACGTTTTATTCCACTACGATGGCGAGATACATTTCATTAGGGTAAGAACACTCGGTACTAAATGCTTTTTTGCTAATGGCTTGAATGATTTTAGAAGGGCACACAACCTCCACGAAAGCATGATTCTACGTTTGGTCGCCAGTGACAAGAACACCACTTTCACCGTTCATATTGACAGACTTGCACACCACCACTCTAGCCCAAAACCCATCATTTATAGAAGGAGATACATCTTTACTGTTGATATCACAGATGATATGCTACAGCAGAACCTACCTTTAACACTTCCTGCAGCAGCTTCCAAATTTGTGTATGGCTCCAAAAAAAAGGGCACCGCATCGGGGTTGGCAGCAGAAGGGACTGAGTTTTTGGATCAAGCAGCAGGTTGCCACTATGTTGGAGTTAGGATTCCGAATCCAACAATAGTGTCGGGGTGGGTTGGCAGCAACATGAGCTTTCTCTCGGATCCATCTGCATGTTGCTTTCGGCTCTACCAGCAGCGATGCTGCTATGTTGGGGTCGAAGTTGTTTGCTTGCAGAGGGTGGAGCGCGACACTGGTGAAATCACCCACCTTCCCAACAAAGAAGTTAATTATTGTTGGGTTCAGAATTTTAGAGGAGAGGTGGATGAAAAGGGATTAGATGTGAACGAGGTAGGCTTATGCATTAAGGTGCTCAATTATATTCTTCTTGAGAAAGGAGGAGGTGTTGATGTGAATAGGGTCTGGGGTTCTGATAGAGCCATTGCTCTCCATTGTGCTATTGCTGGTGGCCCCAAATCCTCACTTGAGATTGTCAAGCTCTTGCTTGATGTTGGGGCTAATGCTGAGTGCCTTGATGCAAGTGACAACAAGTCGGAGGACCTTGATGTTGAATGTGATCAAGGTGGATACGAGATGAAGGTGCTTTATGATCTTCATGCTGATCGTCATCATCCATATCAACGGTGGACTTTGTTCGCTTCTTCTTTCTAA 1089 0.4527 FPRNPMDNIRFTAPFRVQKLLLQVPFTYHRQWLRNYPKYVLFHYDGEIHFIRVRTLGTKCFFANGLNDFRRAHNLHESMILRLVASDKNTTFTVHIDRLAHHHSSPKPIIYRRRYIFTVDITDDMLQQNLPLTLPAAASKFVYGSKKKGTASGLAAEGTEFLDQAAGCHYVGVRIPNPTIVSGWVGSNMSFLSDPSACCFRLYQQRCCYVGVEVVCLQRVERDTGEITHLPNKEVNYCWVQNFRGEVDEKGLDVNEVGLCIKVLNYILLEKGGGVDVNRVWGSDRAIALHCAIAGGPKSSLEIVKLLLDVGANAECLDASDNKSEDLDVECDQGGYEMKVLYDLHADRHHPYQRWTLFASSF 362
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00962 362 SUPERFAMILY DNA-binding pseudobarrel domain 20 98 IPR015300 -
Gma10g00962 362 ProSiteProfiles Ankyrin repeat profile. 284 319 IPR002110 GO:0005515
Gma10g00962 362 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 261 329 - -
Gma10g00962 362 PANTHER UNKEMPT FAMILY MEMBER 261 329 IPR045234 -
Gma10g00962 362 SUPERFAMILY Ankyrin repeat 267 322 IPR036770 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma10g00962 Gma-Chr10 21108907 21113488 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00962 275 329 C2H2 Transcription Factor Family AT5G12850 43.636 2.07e-06 47.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00962 - - gsj:114405466 152.14