Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00943 ATGCGTGTAGTTGCCGTTGATGACGACCAAATGTGTCTCACAGTTTTGGAGAACCTGATTCACAAATGCCATTATAATGTCACTACAACTAATCAGGCAATTAAGGCACTAGAAATGTTGAGGAAAAACATAAACAAGTTTGACCTTCTTACTAGCGATGTAAATATGCCTGACATGGATGGGTTAAAACTTCTTGAGCTAGTGGGACTTCAAATGGGCCTACCTGTTATTATGTTGTCAGCATACAACAATAAAGAGCGGGTGATGAGAGGTGTTATACAGGGTGCTTGTGAGTACTTAACCAAACCAGTTCGAATTGAAGAGTTACAGAACATATGGCAACATGTACTACGAAGGAGGATTGATAGCAAGGATAAGAATAAGATTGCAAGTAAGGGTAAAAAGGCTGCAATATGGCTGAATATAAAACTGGGTCAAAAAAGGAAGGAACAAAGTGAGGATGAGGAAGAGGAAGAATATCATAAAGAGAATGAGGAACACTCAAATCAGAAGAAACCTCGTTTAGTTTGGGATGTCGAGTTGCATAGGAAATTTCTTGTTGTTGTTAATGATCTGGGAATCGACAGTGAGTTTGCTTTCCCCAAGAGAATACTCGACTTGATGAATGGCGAAGGACTTACAAGAGAAAACGTAGCAAGCCATCTGCAGAAATACAAAATCGGTCCCAGAAAACCTACTTGGCAGCCTAGCATGGTTGCTACGTTGGGTAGTAGTGATCCTTACCTGCAGATGGATTTATTAAAAGGCTTTCACAGTACGATATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTGCCGTGAAGGATGCTTTTAGCGTTATCCAAGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACCTAAGAATCAGAGAGGATGCTCAGGAGAAGGAGGCACGGGACGACATATAG 981 0.4118 MRVVAVDDDQMCLTVLENLIHKCHYNVTTTNQAIKALEMLRKNINKFDLLTSDVNMPDMDGLKLLELVGLQMGLPVIMLSAYNNKERVMRGVIQGACEYLTKPVRIEELQNIWQHVLRRRIDSKDKNKIASKGKKAAIWLNIKLGQKRKEQSEDEEEEEYHKENEEHSNQKKPRLVWDVELHRKFLVVVNDLGIDSEFAFPKRILDLMNGEGLTRENVASHLQKYKIGPRKPTWQPSMVATLGSSDPYLQMDLLKGFHSTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSVIQEVVNDLLNPAGQNLRIREDAQEKEARDDI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00943 326 SMART REC_2 1 113 IPR001789 GO:0000160
Gma10g00943 326 Pfam Response regulator receiver domain 3 111 IPR001789 GO:0000160
Gma10g00943 326 ProSiteProfiles Kinesin motor domain profile. 164 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00943 326 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 245 - -
Gma10g00943 326 CDD REC_typeB_ARR-like 3 117 - -
Gma10g00943 326 Coils Coil 146 166 - -
Gma10g00943 326 ProSiteProfiles Response regulatory domain profile. 2 117 IPR001789 GO:0000160
Gma10g00943 326 Gene3D - 168 231 - -
Gma10g00943 326 Gene3D Kinesin motor domain 244 323 IPR036961 -
Gma10g00943 326 SUPERFAMILY CheY-like 1 124 IPR011006 -
Gma10g00943 326 Pfam Myb-like DNA-binding domain 176 226 IPR001005 -
Gma10g00943 326 MobiDBLite consensus disorder prediction 150 171 - -
Gma10g00943 326 Pfam Kinesin motor domain 252 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00943 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 318 IPR027417 -
Gma10g00943 326 Gene3D - 1 137 - -
Gma10g00943 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 172 226 IPR006447 GO:0003677
Gma10g00943 326 SUPERFAMILY Homeodomain-like 170 228 IPR009057 -
Gma10g00943 326 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 245 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00943 Gma-Chr10 18137440 18142655 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00943 1 273 Response Regulator Gene Family AT2G25180 52.128 1.67e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma10g00943 Response_reg 2.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00943 K14491 - gmx:100795697 395.586