Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00940 ATGCCAACAACTCAGAATATTGCTGCTGGGAAGGTGCCACCTGTGGCTATCATCATCTCTCATCAGAATCTTGGAGGTGATGTAAGTTCAATTTTCAGTACACCTTACAAGGCAATCATATGCCCTCTGGGACAGTCTTACTTGGTTTATGCTAGAGAAACAGAGAACAAAGAGTCTGGGAGCAAGCCCATCGCGCAGTACACGGTGGACGCGCGGCTCTACGCCATCTTCGAGCAGTCCGGTGAGTTCGGGAGGTCCTTCAACTACTCTGTCCCTGAGCAGCAGATAATGGCTTACCTTGTCAAAATCCAGTTCGGCGGCTTCATCCAGCCCTTTGGCTCCATGATCGCCATCGACGAGCCCTCCTTCCGCATCCTCGGTTACTCCGACAACGCCCGCAACATGCTCGACATTACTCCGCAGTCCGTGCCTTCGCTCGACGACAAGAATGACACCGCCTTCACTCTCGGCACCGATGTTCGAGCCCTCTTCACTCACTCCAGTGCCTTACTCCTCAAAAAGGCCTTCTCCGAACGCAAAATTAGCCTCATGAACCCTATCTGGATCCACTCTAGAACCTCGAAAAGGCCTTCGTCCTCGCTTTCTTTGAGTAAAAAGAGAACCAGAAAGTCATTCCCTAGCAAATCTCCTGGGAAAGCATCTACAGAGACACCTGCCAAGGCTTGGTTTAGAGAGCTACCAACTGGAGTATTGGACCCTCTTTCGCTAGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTATGAGGCTTCTTCCTCCAACAGAAGCTACTTTGCTAGATTGGGCAATAAACTTAATGGCAAATGTTGCTCAAATGGAAAACTTGAACAACATGAATGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCAAGTAATATTAAATCATTTTTTGTTGTAA 939 0.4814 MPTTQNIAAGKVPPVAIIISHQNLGGDVSSIFSTPYKAIICPLGQSYLVYARETENKESGSKPIAQYTVDARLYAIFEQSGEFGRSFNYSVPEQQIMAYLVKIQFGGFIQPFGSMIAIDEPSFRILGYSDNARNMLDITPQSVPSLDDKNDTAFTLGTDVRALFTHSSALLLKKAFSERKISLMNPIWIHSRTSKRPSSSLSLSKKRTRKSFPSKSPGKASTETPAKAWFRELPTGVLDPLSLEQVMQSQSEEECAQLMRLLPPTEATLLDWAINLMANVAQMENLNNMNARNIAMVFAPNMTQVILNHFLL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00940 312 Gene3D Rho GTPase activation protein 209 309 IPR008936 GO:0007165
Gma10g00940 312 Gene3D PAS domain 103 208 - -
Gma10g00940 312 SUPERFAMILY PYP-like sensor domain (PAS domain) 103 202 IPR035965 -
Gma10g00940 312 MobiDBLite consensus disorder prediction 194 224 - -
Gma10g00940 312 CDD RhoGAP 227 302 - -
Gma10g00940 312 Pfam PAS fold 98 198 IPR013654 GO:0006355
Gma10g00940 312 PANTHER TWO-COMPONENT HISTIDINE KINASE 54 197 - -
Gma10g00940 312 PANTHER PHYTOCHROME 54 197 - -
Gma10g00940 312 SMART RhoGAP_3 96 311 IPR000198 GO:0007165
Gma10g00940 312 ProSiteProfiles Rho GTPase-activating proteins domain profile. 144 312 IPR000198 GO:0007165
Gma10g00940 312 SUPERFAMILY GTPase activation domain, GAP 227 305 IPR008936 GO:0007165
Gma10g00940 312 Pfam RhoGAP domain 227 304 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00940 Gma-Chr10 17699805 17708919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00940 52 197 Histidine Kinase Gene Family AT2G18790 59.873 3.27e-55 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00940 K12121 - gmx:100799831 224.942