Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00928 ATGGCCACTTCTCCAAACGTGACAACATTTAACACCAAACTCCACTCTTGCGCCTACAAATCCCGCTCCATTCCTCCCACATCATGCATCAATTCCACCACCTTGCATTGCTCAATTCCCATCATGGAAGGTTGCAAAATGTCTCCACAAAAGCCATGGAAGAAAGGGCCAACAAGGGGCAAAGGTGGCCCTCAAAACTCTTCATGTGAGTATAGAGGTGTTAGGCAGAGAACATGGGGAAAATGGGTGGCTGAGATAAGAGAGCCAAAAAAGAGAACAAGGCTTTGGCTTGGCTCTTTTGCCACAGCAGAAGAAGCTGCCTTGGCCTATGATGAGGCTGCAAGGAGACTCTACGGCCCTGATGCTTACCTTAACCTCCCCAACGTGATGATGATGCAAAAAATTCAACCAACAGCAAGCTTCACAAATTCCACCATCACCACCACAAAATCTCACAAGTACTTCAATTGGTTCCCTTCCAAGAACTTCATTTCAATGTTTCCCTCAAGTGGTGGATTGCTCAACCTCAATGCTCAACCTAGTGTCCATGTCATCCACCAGAGGCTGCAAGAGCTCAAGCAAAATGGGGTGGTTGCAACAAGTCAAAATCAATCATCACCGCATGCTAGTTCATTATCCACTCATCCAAAGGTTGTGGTGGAACTTGAAAACTTAGACATCCAAAACCATGCAGAAACTCTTGTTCCTCCACTGCAAGAGGGTAATTCTCAAGTTTCATCACAGAAAACTATTATTGGTGGTGATTTTGAGAAGCCCCAGATAGACCTACTTGAGTTTCTTCAGCAGATGGGAATACTAAAGGAGGAAAGAGAGGAAGAAAAAACTGATAGCTCAGGAAGTTCAACAACAGTGTCTGAAGCAGTATCAAGAGATGATCAGAGTGAACAACAACCTGGAGTGTTTTCTGATGATATGAGTAGTGTTAACTGGGAGGAATTGATGGAGATGCATGAGCATGACCGTGGAGTTGTAGATAATTATCATGCATTAGAAGAAATCCAGTTTGAAGCATATGACATAAACGAGGACCTTACTTTCTCCACTTCCATTTGGAACTATTAA 1083 0.4377 MATSPNVTTFNTKLHSCAYKSRSIPPTSCINSTTLHCSIPIMEGCKMSPQKPWKKGPTRGKGGPQNSSCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPNVMMMQKIQPTASFTNSTITTTKSHKYFNWFPSKNFISMFPSSGGLLNLNAQPSVHVIHQRLQELKQNGVVATSQNQSSPHASSLSTHPKVVVELENLDIQNHAETLVPPLQEGNSQVSSQKTIIGGDFEKPQIDLLEFLQQMGILKEEREEEKTDSSGSSTTVSEAVSRDDQSEQQPGVFSDDMSSVNWEELMEMHEHDRGVVDNYHALEEIQFEAYDINEDLTFSTSIWNY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00928 360 MobiDBLite consensus disorder prediction 48 69 - -
Gma10g00928 360 CDD AP2 69 129 IPR001471 GO:0003700|GO:0006355
Gma10g00928 360 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
Gma10g00928 360 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Gma10g00928 360 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Gma10g00928 360 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 42 357 - -
Gma10g00928 360 MobiDBLite consensus disorder prediction 275 310 - -
Gma10g00928 360 MobiDBLite consensus disorder prediction 285 310 - -
Gma10g00928 360 Gene3D AP2/ERF domain 70 129 IPR036955 GO:0003700|GO:0006355
Gma10g00928 360 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 42 357 - -
Gma10g00928 360 SUPERFAMILY DNA-binding domain 70 127 IPR016177 GO:0003677
Gma10g00928 360 Pfam AP2 domain 69 119 IPR001471 GO:0003700|GO:0006355
Gma10g00928 360 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00928 Gma-Chr10 17175241 17176323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00928 46 360 AP2-EREBP Transcription Factor Family AT3G57600 46.667 7.72e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g00928 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00928 - - gmx:100808719 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00928 10 17175241 17176323 Gma10g00928 10 17175241 17176323 ECH