Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00916 ATGAAGAACCATGCATTTGGCGCCCTCTTTCTCTCTACCCTTGTTCTTCTTGTCTCTACTGCAAAGGGTAAGTGTCCACCCTCCTTTGTTTGTGGGAACCTCGGCACCATGCACTTCCCTTACACTGACACAAAACACCCTCACTGTGGCCTGTTGGTGATCTATGGCTGCGATGACCGCGACAATGATACCATTAAAACCATTAAGAACAACGGAGCATGGTTTTACATCACACGCGATCAGAACAACGGTACCATTTTGTTCAGAGATGACAAACTCCGCACACTCTTGCTAACCAGACGATGTGGAGTCTTCAGCAACAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCACTTCATGAATCTCAATCTATTCATATGCAACAGCACTCTCAATGTCACCCCTCCTTCTTCAGTCTTTTCCAAATCTACCATATGCAAGGATGAGGACATCTTCTATCGCCCGACTAATATGGATGATTATTATGATTATCATTATCCTTATTTTGAAGCATGTTCGAGGGTTATACTTCCAATCAGAGATTCAGAGATTGTACCTGACAATGGAAACCTCTTTGACTATCTATCAGCTGATATTCCTGTCCAAGCAGAGGTGTTTCATGATTGTTCTTCTTGTTACTATCTTAGAGGAGGCCGGTGTCAACTTGACAACCAAGGGAAGTTCTTCTGTGCTGaagAGAAAACTAGTAAGAAGGAGAAGATAGTGGTAGCAGCTACTTCAGTTGCTGGAGGACTGGGAATTTTGATGGTCTTGGCTTGCATCTTACGAAGATACTATTTTCACAAGAAGAATCCTACTTACCTAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACTAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTATGGCAGTGTATATAAAGGGAGGTTACAAAATGGAAGCCTTGTGGCAGTGAAGATTTTAAGCAAGTTAAAAGGTGATGGAGATGAATTCATCAATGAAGTGGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCCTGGAGGGCTCCAAAAGAGTTCTCATATACGAGTATATGCCAAATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAAGCATAAACTCACATTGAATTGCAGAACTATGTACAATATCGTCATTGGTGTTGCTCGAGGATTGGAGTACTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAACATACTGCTTGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGGCTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCCCATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAATAATAGCAGAGTTGATTTTTCAAGTGAAAATTACTTTCCACATTGGATATACAGCCATCTTGAATTAAATCAAGAGCTTCAATTGCGCTGTATTAAAAAACAAAATGATAAAGAAATGGTGAGAAAAATGACTATAGTGAGTTTATGGTGCATACAAACTGACCCTTCAAAACGACCTGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTTGTTGCAAGTTCCACCCAAACCTTTCCTTTTTTCGTCCTCAGCCCCTGAATCACAATCAAGCGAGACTTATAGTTATTGA 1839 0.398 MKNHAFGALFLSTLVLLVSTAKGKCPPSFVCGNLGTMHFPYTDTKHPHCGLLVIYGCDDRDNDTIKTIKNNGAWFYITRDQNNGTILFRDDKLRTLLLTRRCGVFSNNYTSLDTTSPFLSLHFMNLNLFICNSTLNVTPPSSVFSKSTICKDEDIFYRPTNMDDYYDYHYPYFEACSRVILPIRDSEIVPDNGNLFDYLSADIPVQAEVFHDCSSCYYLRGGRCQLDNQGKFFCAEEKTSKKEKIVVAATSVAGGLGILMVLACILRRYYFHKKNPTYLMIENFLKQHGHLSAKRYSYLEVKKMTNSFKNKLGQGGYGSVYKGRLQNGSLVAVKILSKLKGDGDEFINEVASISMTSHVNIVSLLGFCLEGSKRVLIYEYMPNGSLEKFIYEEKDPLKHKLTLNCRTMYNIVIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTVGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNSRVDFSSENYFPHWIYSHLELNQELQLRCIKKQNDKEMVRKMTIVSLWCIQTDPSKRPAMSKVVEMMEGSISLLQVPPKPFLFSSSAPESQSSETYSY 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00916 612 SMART serkin_6 306 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00916 612 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Gma10g00916 612 Gene3D Phosphorylase Kinase; domain 1 282 380 - -
Gma10g00916 612 Gene3D Transferase(Phosphotransferase) domain 1 381 588 - -
Gma10g00916 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Gma10g00916 612 PANTHER RUST RESISTANCE KINASE LR10-RELATED 31 612 IPR045874 GO:0004672
Gma10g00916 612 Pfam Protein kinase domain 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00916 612 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 31 612 - -
Gma10g00916 612 SUPERFAMILY Protein kinase-like (PK-like) 289 581 IPR011009 -
Gma10g00916 612 ProSiteProfiles Protein kinase domain profile. 306 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00916 Gma-Chr10 16016821 16019592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00916 11 607 Receptor kinase-like Gene Family AT5G38260 39.251 2.43e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma10g00916 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00916 - - gmx:100807312 1236.09