Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00893 ATGCAACTAACAGAACAATCTTCTCAAGAGGAGGCTATAAAACAGAAGGATGTCCTGGCTACAGAAGTTTCCTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGATGAGCGAGACCGGCAATTATCTCAAGTACAAACTTTAAGTTCTGAATTAGAGAAAGTTAAAGAATCTAGGAAACACTCCTCCACTGAATTGGACAGCTTGACCTTAAAAGCTAATGATCTGGAGGTTGGCCAAAAACATTCTTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGCTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTACAAGGTTTGCTTCTTTGCCTATGGTCAGACAGGGTCAGGAAAAACTTATACAATGATGGGAAGGCCTGGACATTTAGAGGAGAAGGGCTTCATACCTCGTTCATTAGAGCAAATATTTCAAACAAAGCAGTCTCAACAACCTCAAGTCTGGAAATATGAAATGAACACTCGAAAGGTGGCAACGCCACTAAAAAAGGCACGACTTTGGCTACGTGGCGGTGGTGGGAGCAGCAGGTCCACTTCGGCTTCAAGTAGCGGTGGTGGGAGCAGCGGGAAACAAAACGTCAGGGTGGTAGCGGGACGGAGTTCACGGCGGGATGAAGTAGTTCAGGCAATAGTGGGGGTGCTAGGTTTTTGGAGGGACGGTGTACCTACAAGCACCGTCTTTGATGACTTCCATCAAAACTACAACGACAGGGTTATAGACAAATGTCGTTGTACAACAAATGCGCCACATAAAAAACTTATATAA 810 0.4346 MQLTEQSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQTLSSELEKVKESRKHSSTELDSLTLKANDLEVGQKHSFTFDKVFTPEASQEEAFVEISQLVQSALDGYKVCFFAYGQTGSGKTYTMMGRPGHLEEKGFIPRSLEQIFQTKQSQQPQVWKYEMNTRKVATPLKKARLWLRGGGGSSRSTSASSSGGGSSGKQNVRVVAGRSSRRDEVVQAIVGVLGFWRDGVPTSTVFDDFHQNYNDRVIDKCRCTTNAPHKKLI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00893 269 Pfam Microtubule binding 59 172 IPR031852 GO:0008017
Gma10g00893 269 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 76 - -
Gma10g00893 269 PANTHER KINESIN-LIKE PROTEIN KLP-3 76 169 - -
Gma10g00893 269 SMART kinesin_4 27 268 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma10g00893 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 167 IPR027417 -
Gma10g00893 269 MobiDBLite consensus disorder prediction 187 210 - -
Gma10g00893 269 Coils Coil 16 57 - -
Gma10g00893 269 MobiDBLite consensus disorder prediction 183 213 - -
Gma10g00893 269 Gene3D Kinesin motor domain 1 173 IPR036961 -
Gma10g00893 269 PANTHER KINESIN-LIKE PROTEIN 5 76 - -
Gma10g00893 269 PANTHER KINESIN-LIKE PROTEIN 76 169 - -
Gma10g00893 269 ProSiteProfiles Kinesin motor domain profile. 29 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00893 Gma-Chr10 15286109 15290616 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00893 85 152 Calmodulin-binding Proteins AT5G65930 51.471 1.14e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00893 K10405 - gmx:100788335 175.637