Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00880 ATGAAAACCAATTCAGTCCAATTCCATGAACCAATTATTAATCCCAAGAATTTCCCCAATATCATTTTCTACATCAAGGTTGCTCCATCTTTAGTTGTTGGTTGCACCATGGTCCTCAAGCCTACCGAGCAAACACCTATCTCTACTTTCTTTAATGCTCATCTTGCTAAATTGGTTGGAATCCTAGATGAAGTGATCAATGTAGTGCCTGGATTTGGCCCAACTGTTGGTGCTACATTAAGCTTACACATGGATGTTGATAAGGTTAGCTTTACTTGTTCAACACAAATAGAACGTGAGATAATGCAGGTTGCAGCTAAGAGTAACTTGAAACAAGCTTCACTTGAATTAGGAGGCAAGTCACCCTTCATAATTTTTTTAAAGGTTCACAAATGCATTGGATGA 405 0.3827 MKTNSVQFHEPIINPKNFPNIIFYIKVAPSLVVGCTMVLKPTEQTPISTFFNAHLAKLVGILDEVINVVPGFGPTVGATLSLHMDVDKVSFTCSTQIEREIMQVAAKSNLKQASLELGGKSPFIIFLKVHKCIG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00880 134 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 115 122 IPR029510 GO:0016491
Gma10g00880 134 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 13 127 - -
Gma10g00880 134 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 10 131 IPR016162 GO:0016491
Gma10g00880 134 Pfam Aldehyde dehydrogenase family 12 126 IPR015590 GO:0016491
Gma10g00880 134 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 127 - -
Gma10g00880 134 SUPERFAMILY ALDH-like 12 126 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00880 Gma-Chr10 13941410 13942182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00880 10 126 Aldehyde Dehydrogenase Gene Family AT3G24503 61.475 1.09e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00880 K12355 - gmx:100817721 179.874