Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00876 ATGGGGAAGAAGAAGAAGAGAAGTAGGGTTTCCGAAGACGAGGAAATCGAATCCGATACCAACCCCTTCGATAAAAACGAAAACTCTCTCTATCAGGTTCTTGGTGTGGAGAAAACAGCATCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAAAACGTTATTGCTATTCTTGGGGATGAAGAAAAACGGGCCGTTTATGATCAGACTGGTTTTGTTGATGATGCTGAACTTGCAGGGGATGTTGTTCAGAATCTTAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGGTCTGACATTGAGAAAAATGATTTGATTGATCTGTACAAGAAGTGCAACGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGATTCAAGGATATTATTGATGAGGTTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGACAAAGAAAATATCAGAAATCAAGCCACCAACTAGTCCCTTAAGAAGGAGGGCAAAATCATCAAAGAAGCAACCAGAAAAAGAGCTTTATGCTATCATATCACAACGCAAACATGAGAGGAAAGACCACTTTGATTCCATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGGTGGAAAGTGGAAGGTCCTCAAAAAAATTAAAGCGAAAATAA 846 0.3972 MGKKKKRSRVSEDEEIESDTNPFDKNENSLYQVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVIAILGDEEKRAVYDQTGFVDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDIEKNDLIDLYKKCNGNMNRLFCSMLCSDPKLDSHRFKDIIDEVIAAGELKETKAYKKWTKKISEIKPPTSPLRRRAKSSKKQPEKELYAIISQRKHERKDHFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVESGRSSKKLKRK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00876 281 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Gma10g00876 281 SMART dnaj_3 28 86 IPR001623 -
Gma10g00876 281 Pfam DnaJ domain 30 91 IPR001623 -
Gma10g00876 281 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 281 IPR042977 -
Gma10g00876 281 MobiDBLite consensus disorder prediction 202 221 - -
Gma10g00876 281 CDD DnaJ 31 83 IPR001623 -
Gma10g00876 281 PRINTS DnaJ domain signature 31 49 IPR001623 -
Gma10g00876 281 PRINTS DnaJ domain signature 49 64 IPR001623 -
Gma10g00876 281 PRINTS DnaJ domain signature 66 86 IPR001623 -
Gma10g00876 281 PRINTS DnaJ domain signature 86 105 IPR001623 -
Gma10g00876 281 MobiDBLite consensus disorder prediction 1 16 - -
Gma10g00876 281 Gene3D DnaJ domain 14 125 IPR036869 -
Gma10g00876 281 SUPERFAMILY Chaperone J-domain 27 100 IPR036869 -
Gma10g00876 281 MobiDBLite consensus disorder prediction 246 281 - -
Gma10g00876 281 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 281 - -
Gma10g00876 281 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00876 Gma-Chr10 13839824 13843327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00876 31 91 C2H2 Transcription Factor Family AT1G74250 42.424 5.18e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00876 K09529 - gmx:100811936 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00876 10 13839824 13843327 Gma10g00876 10 13839824 13843327 ECH