Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00850 ATGGAAGCAGGATTCCTTTTGGGATTTTTGTTCGCCCTTGACTATGAAATGGTTAAGGTGGCGAACCTATTGCATAACTTCGATGATCTGGAGCGACTTTATTCAGAGGTTCATTTGCTCAAGACTTTGAAGCATAAAAATATAATTAAGTTTTACAATTCATGGGTTGACACCAAGAATGAGAACATCAACTTCATTACTGAAATTTTCACCTCAGGAACATTGCGTCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTGTGAAGAAATGGTCCAGGCAGATTTTGGAAGGATTTTTATATCTTCACAGTCACAATCCGCTGGTTATTCATCGAGACCTTAAGTGTGATAACATTTTTGTTAATGGTAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGAAGCTATCCTTCAACAGGCCAATTCAGCTCACAGTGTCATAGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACCGTTGAGTACCCATATATTGAATGCACCAATGCTGCTCAAATATACAAGAAAGTGACATATTTAAAAGAATGGCTTCACAACTTAAGAATAGTAGATCAAACAGTAATGGTACAAGATGACGAAGAACCTGATGATGGAGTTGTGCCTTCACCATGA 708 0.3884 MEAGFLLGFLFALDYEMVKVANLLHNFDDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSRQILEGFLYLHSHNPLVIHRDLKCDNIFVNGNQGEVKIGDLGLEAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTYLKEWLHNLRIVDQTVMVQDDEEPDDGVVPSP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00850 235 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00850 235 SMART serkin_6 4 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00850 235 Gene3D Transferase(Phosphotransferase) domain 1 70 225 - -
Gma10g00850 235 Pfam Protein kinase domain 21 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00850 235 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 203 - -
Gma10g00850 235 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Gma10g00850 235 SUPERFAMILY Protein kinase-like (PK-like) 18 216 IPR011009 -
Gma10g00850 235 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 15 203 - -
Gma10g00850 235 Gene3D Phosphorylase Kinase; domain 1 14 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00850 Gma-Chr10 13167243 13169279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00850 29 207 MAP Kinase Kinase Kinase AT5G28080 73.184 2.75e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma10g00850 Pkinase 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00850 K08867 - gmx:100805392 450.284