Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00847 ATGGGGTTCTCCATAGCTGTTGATAAATTAGAAGAAGAAGCACAACAACAACAACAAGAGCAAGAGACAAAGTCTTTAGGTTCCTCTTTGAATATCGTCATGGCTTCTTCAAGTGTTAAGAGCAATACCAACTCAACAACTCAACTTGAACCATTCCTCCCACCTTTACATCTTCATCATCAACAACAACCACCACAACATCATTTTCATCATCATCAAATACCAGACCAACAAATCTCTTTTGGGATGATGCCATCTTCCTCATTAGCTTCTATCCCAGGAAATTTCTTAAGCAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTTTTTTTGTATCTTGAAGGTCAGGCTGACCCTTCTAGTGTTCAAGACCAAAAACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAACCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTAACATGGGATTACCCTCCACACAAACCAGCACTGGCTCAAAGAGACAACCAGAGTCATCCATGGCCAAGCCCAATCCACACACTGAAGCCCCTTCTGCACCTGAGCCACCCAAAGCTGTAAAGCGAGAGGGCAATCGCAAGGGAACAACATCAAGCTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTAAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTCAGGAAAAAGgcgtacgttcagcaactagagtcaagtaggattaagcttaatcagatAGAACAAGAGTTACAACGTTCTAGAGCTCAAGGCATATTAATGGGCGGAAATACACTTCTGGGTGGGGAGCAAGGCTTTCCTATGGCCATGAGTGGAATTAGCTCAGAGGCTGCAATGTTCGACGTGGAATATGCGAGATGGTTAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGCACTCCAAGAACACCTTCATGAGAACGAGCTTCGTTTATATGTGGACAATTGCCTGGCTCACTATGACCAAGTAATGAGCCTTAAGAGCATGGTGGCCAAAATCGACGTATTCCACCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGCTTCAGGCCATCTGAACTCATCAAGATTATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGATGCTCTTAACCAATCTCTCTCAGAGACTATAACATCGGACTCTTTGTGGTGTCCTCCAAATATGAATAACTACATGGGACAAATGGTTGTGGCAATGAACAAACTCTCCACTCTTGAAAGCTTTGTGAGACAGGCTGATAACCTCAGGCACCAGACAATTCACCGTCTGCACCAACTTCTAACAACACGCCAAGCTGCAAGGTGCTTGGTGGCCATTTCTGAGTACTTCCATCGTCTCAGAGCCCTAAGTTCTTTGTGGTCGACTCATCCTCGCCAAGATCAGTAG 1554 0.4427 MGFSIAVDKLEEEAQQQQQEQETKSLGSSLNIVMASSSVKSNTNSTTQLEPFLPPLHLHHQQQPPQHHFHHHQIPDQQISFGMMPSSSLASIPGNFLSKDSGAYDLGELDQAFFLYLEGQADPSSVQDQKQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVNMGLPSTQTSTGSKRQPESSMAKPNPHTEAPSAPEPPKAVKREGNRKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQIEQELQRSRAQGILMGGNTLLGGEQGFPMAMSGISSEAAMFDVEYARWLEEHHRIVCELRAALQEHLHENELRLYVDNCLAHYDQVMSLKSMVAKIDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLWCPPNMNNYMGQMVVAMNKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWSTHPRQDQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00847 517 Pfam Seed dormancy control 316 389 IPR025422 GO:0006351|GO:0043565
Gma10g00847 517 Gene3D - 224 274 - -
Gma10g00847 517 MobiDBLite consensus disorder prediction 122 228 - -
Gma10g00847 517 SUPERFAMILY Leucine zipper domain 225 267 IPR046347 GO:0003700|GO:0006355
Gma10g00847 517 MobiDBLite consensus disorder prediction 122 142 - -
Gma10g00847 517 Pfam bZIP transcription factor 225 258 IPR004827 GO:0003700|GO:0006355
Gma10g00847 517 SMART brlzneu 221 307 IPR004827 GO:0003700|GO:0006355
Gma10g00847 517 MobiDBLite consensus disorder prediction 151 187 - -
Gma10g00847 517 CDD bZIP_HBP1b-like 225 277 - -
Gma10g00847 517 ProSiteProfiles DOG1 domain profile. 298 512 IPR025422 GO:0006351|GO:0043565
Gma10g00847 517 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Gma10g00847 517 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 223 267 IPR004827 GO:0003700|GO:0006355
Gma10g00847 517 PANTHER TRANSCRIPTION FACTOR TGA9 108 515 - -
Gma10g00847 517 Coils Coil 244 271 - -
Gma10g00847 517 MobiDBLite consensus disorder prediction 1 29 - -
Gma10g00847 517 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 108 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00847 Gma-Chr10 13033277 13042160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00847 94 516 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.077 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma10g00847 DOG1 9.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00847 K14431 - gmx:100800059 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00847 10 13033277 13042160 Gma10g00847 10 13033277 13042160 ECH