Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00841 ATGAGCCACCAATCCAACTTCATCACAACACAAGGAAGAGATGACCCCAACAACAACACAGGAATTTCAATCCAAAGCTACAGGGTTAGGCCAGATTCTGAGTTTCTCACACTCAAGGAATCTTTCAAGACATGTCTTGGTTATGGTGCCTTTACACAGAATAGGGTGAATTGGCCTGGTTTTCATGTGCTGAGGAGTGCTTTTGAGGCCACACCCTTCACTGTGAACCAGTTTCTGTAA 240 0.4458 MSHQSNFITTQGRDDPNNNTGISIQSYRVRPDSEFLTLKESFKTCLGYGAFTQNRVNWPGFHVLRSAFEATPFTVNQFL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00841 79 Pfam Pectinesterase 1 47 IPR000070 GO:0030599|GO:0042545
Gma10g00841 79 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 1 47 - -
Gma10g00841 79 SUPERFAMILY Pectin lyase-like 3 79 IPR011050 -
Gma10g00841 79 MobiDBLite consensus disorder prediction 1 22 - -
Gma10g00841 79 PANTHER PECTINESTERASE 1 47 - -
Gma10g00841 79 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 45 79 - -
Gma10g00841 79 PANTHER PECTINESTERASE 45 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00841 Gma-Chr10 12865919 12866296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00841 1 79 Carbohydrate Esterase AT3G60730 39.200 8.51e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00841 K01051 - gmx:100792852 127.872