Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00839 ATGGTTCACAACTACGTGTTCGTGAATCTCACCGTCCTCGTTGTCCTCTCGGCAACTTTGGTTTCTCGCTGTTTCGCGTTTACGGATCCCCCTGACGCAGTCACAGCTCTGCAGGATCTATACAGGGCTTTAAACAGCCCAGCAGTGCTGAATGGATGGAACGGTAACGATCCTTGTGAGGAATCTTGGACAGGAGTAGCATGTTCTGGCTCATCAGTTATACACCTCAAAATTCGTGGACTAAGCCTTACCGGGTATCTTGGAGGCTTGCTCAATAATCTACAAAACTTGAAGCAACTTGATGTCAGTTCTAACAACATAATGGGTGAAATACCACTGGGTTTACCCCCGAATGCCACACATATAAATATGGCTTGCAACTATTTGGGCCAAAATATACCCCATACATTGTCAACCATGAAAAAACTAAGGCATCTGAATTTAAGCCATAATTTCTTGAATGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCGTACAATAATTTCACAGGTGATCTGCCAAGTTCATTTGGTTCCTTGACAGACCTTAATAGATTGCTCCTGCAGAATAACAGATTCACAGGATCAGTCACCTACCTGGCTGAACTTCCACTCATTGATTTGAACATTCAAGATAATCTGTTCAGTGGCATTCTTCCACAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAACAAGTTCCATGCAGTAGACGGCTCTCCTCCCTGGGCATTTCCTTTGGACAATGTACCCATTGAGCAAAACACTAGTCGCCCACCCGTAACTCAGGCGAATGCCATCGAGAACTACGATCCTCCTAAAGTAAGGAAACAAAAGAACAAACATATGGGTCCCGGAGGAATAGCTTTTATGGTTGGTACAGGAACATTATTGGCGACAGGTTTTGCGCTCTTCATTGGGATCCGATTGAAAAAGCTCCATAGACAGAGAATGGAGGACTATGAAAGAAACCATAGTTCATTGCCTAGTCAAACCAAAGATGTATCTACTACGGCGATTGACGAGAGCCTGCAAATCCCACCTTACAATGCTGCATCTCTTTTGAGTCCAAGGCGATTAACTTCCCAGATCCATAAAAGAACAGGGCAAACATCAAGAAAGAGTTTTTCGGGAAGAGACAGATTCACTGGAAGGACAAAGGTTTATACAGTAGCGGAGGTTCAGTTGGTTACCAACAGTTTCCATGAAGACAACCTTCTGGGAGAGGGATCCCTTGGCCCTGTTTACAGAGCTGAATTTCCAGAAAACAAGGTTTTCGCAGTGAAGAACATTAACATGGCTGGTATGTCTTTCATTGAAGAGGAAAAGTTCTTGGATGTAGTTTGCACTGCTTCCCGTCTGAACCACCCCAACATAGTTTCACTTAAAGGCTACTGCTTGGAGCATGGACAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCACAGTGCAGCATACAAACCTTTATCTTGGGGCACACGTCTCAGAATCGCTTTAGGAGTTGGTCAGGCCCTGAACTATTTGCACTCGACTTTCTCTCCTGCTGTCTCCCATGGAAACTTAAAGGCTACCAATGTTCTACTGGACGAAAATCTCATGCCTCGTGTTACTGACTGCGGCTTGGCTATTTTGAGACCACTGACAAGCGACAAAATAAAAAATCGGGCTTCTGAGATTGATATTAGGGATATAGGATATAGTTCCCCAGACCATGGCCAACCAGGAATTGGCAGCACGAAGAGTGACATCTTTTCCTTCGGAGTACTGCTTCTTGAACTGTTAACAGGAAGAAAACCATTCGATGGTTCCAGGCCAAGGGAAGAGCAATATCTGGCAAAGTGGGCTTCATCAAGGCTTCATGATTGCGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAAAGAACATTTTCATCCAAGgctctttctcgttatgctgatatcatctccctctgcactcagCCAGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGGACTCTCTTGTATCGTTTTCTCAAAATCTCCTTTCAAAGAGTGGTGCTGCAGATGACACTGAACTTGATCCACTTGAGAGGTCTTTTCGCACAACCACCTCACGCTTTATCAGTTCACCCGCATTGAGCTATGTATCTGCCTGA 2196 0.4321 MVHNYVFVNLTVLVVLSATLVSRCFAFTDPPDAVTALQDLYRALNSPAVLNGWNGNDPCEESWTGVACSGSSVIHLKIRGLSLTGYLGGLLNNLQNLKQLDVSSNNIMGEIPLGLPPNATHINMACNYLGQNIPHTLSTMKKLRHLNLSHNFLNGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLTDLNRLLLQNNRFTGSVTYLAELPLIDLNIQDNLFSGILPQHFQSIPNLWIGGNKFHAVDGSPPWAFPLDNVPIEQNTSRPPVTQANAIENYDPPKVRKQKNKHMGPGGIAFMVGTGTLLATGFALFIGIRLKKLHRQRMEDYERNHSSLPSQTKDVSTTAIDESLQIPPYNAASLLSPRRLTSQIHKRTGQTSRKSFSGRDRFTGRTKVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPENKVFAVKNINMAGMSFIEEEKFLDVVCTASRLNHPNIVSLKGYCLEHGQHLLVYDYVRNLTLDDALHSAAYKPLSWGTRLRIALGVGQALNYLHSTFSPAVSHGNLKATNVLLDENLMPRVTDCGLAILRPLTSDKIKNRASEIDIRDIGYSSPDHGQPGIGSTKSDIFSFGVLLLELLTGRKPFDGSRPREEQYLAKWASSRLHDCDSLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRPPMSEIVDSLVSFSQNLLSKSGAADDTELDPLERSFRTTTSRFISSPALSYVSA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00839 731 Gene3D Transferase(Phosphotransferase) domain 1 490 706 - -
Gma10g00839 731 SUPERFAMILY L domain-like 41 238 - -
Gma10g00839 731 Pfam Leucine rich repeat 160 201 IPR001611 GO:0005515
Gma10g00839 731 Pfam Leucine Rich Repeat 142 159 IPR001611 GO:0005515
Gma10g00839 731 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 11 695 - -
Gma10g00839 731 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Gma10g00839 731 Gene3D Ribonuclease Inhibitor 31 260 IPR032675 -
Gma10g00839 731 Gene3D Phosphorylase Kinase; domain 1 370 488 - -
Gma10g00839 731 Pfam Protein tyrosine and serine/threonine kinase 414 687 IPR001245 GO:0004672|GO:0006468
Gma10g00839 731 SUPERFAMILY Protein kinase-like (PK-like) 387 687 IPR011009 -
Gma10g00839 731 ProSiteProfiles Protein kinase domain profile. 411 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00839 731 PANTHER LEUCINE RICH REPEAT KINASE 2 11 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00839 Gma-Chr10 12772334 12777614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00839 11 731 Strubbelig Receptor Gene Family AT5G06820 54.247 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma10g00839 PK_Tyr_Ser-Thr 5.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00839 - - gmx:100793182 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00839 10 12772334 12777614 Gma10g00839 10 12772334 12777614 ECH