Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00838 ATGTTGTTTTTGGCCATGGACGAATCACCGGCGAACAGAGAGAGCAAAAGCGAGGAAGAAGAAGAAGATGATGGCTACATGGGTGACCTTTCTCAGTTTCTTCCTTCCGATGCTCTCGAACCTGCTAAGTTGTCTTCGTCCAAAAAGATTTCCAGCAAGAAAGATCCTTCAGTCAACTCTTCCAAGAACTGGTTGAAAACTCTTAACTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGGAAGCAACAAGAAGAGGATGAGCAAACATTAGCGAAAGTGGAAGCTCCAATACCACAATCCAACATTGGATTTAAGCTTCTCAAACAGATGGGTTATTCTCCAGGTTCTGCCCTAGGCAAGCAAGGCTCGGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCTGGTGTAGGCTTAGAAGACCCCCACAAGGAGAAGAGGAAAAAGGAGGAAATCATGATGGACAGGAAAAGAAGGAAAGAGGAGGACCTAATGAAAGAATTTGGGTCTAGGCAGAAGTCACAGTGGCAGAGTAGGAGAGTTATAATTAATTACAATAAGGCAAAGGCTGCCCTTGACCAACTGGAGAATAGGGTAATTGTGGAGCCACAAAAGAATGACGATGTTGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCACGATGTTTTGATGAAACTGAGGGATGAATTTAATTATTGCCTCTTTTGTGGATGCCAATATGAATCGAACCATGCCCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAA 804 0.4465 MLFLAMDESPANRESKSEEEEEDDGYMGDLSQFLPSDALEPAKLSSSKKISSKKDPSVNSSKNWLKTLNWQERRKLERERKQQEEDEQTLAKVEAPIPQSNIGFKLLKQMGYSPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKKEEIMMDRKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLENRVIVEPQKNDDVAEGEEEEEEEITEEDLHDVLMKLRDEFNYCLFCGCQYESNHALLANCPGTNEDDH 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00838 267 Coils Coil 73 93 - -
Gma10g00838 267 MobiDBLite consensus disorder prediction 140 173 - -
Gma10g00838 267 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 22 267 - -
Gma10g00838 267 MobiDBLite consensus disorder prediction 1 94 - -
Gma10g00838 267 Coils Coil 150 170 - -
Gma10g00838 267 MobiDBLite consensus disorder prediction 51 67 - -
Gma10g00838 267 SMART DUF4187_2 213 267 IPR025239 -
Gma10g00838 267 SMART G-patch_5 97 143 IPR000467 GO:0003676
Gma10g00838 267 Pfam G-patch domain 99 142 IPR000467 GO:0003676
Gma10g00838 267 ProSiteProfiles G-patch domain profile. 99 145 IPR000467 GO:0003676
Gma10g00838 267 MobiDBLite consensus disorder prediction 140 172 - -
Gma10g00838 267 PANTHER UNCHARACTERIZED 22 267 IPR039249 -
Gma10g00838 267 MobiDBLite consensus disorder prediction 68 91 - -
Gma10g00838 267 Pfam Domain of unknown function (DUF4187) 216 267 IPR025239 -
Gma10g00838 267 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00838 Gma-Chr10 12710028 12712838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00838 91 141 C2H2 Transcription Factor Family AT5G26610 45.098 7.68e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00838 - - gsj:114369185 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00838 10 12710028 12712838 Gma10g00838 10 12710028 12712838 ECH