Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00813 ATGGAGAAAAAGCCTCCGCCGCCGCTGGATGACTCGCAGCGGCTGTTTCAGCTGCTGTGGATCGACGAGGACGAGATCGAGCTCTTGCAAGGGTTCCTCGACTACACATCGCAGCGAGGATCCTTGCACCACAACGACATTGCTTTGTTCTATGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTCGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGGAACATCCGTAACAAGATTTGCTTCGGCAAGGAATTCTCCTTCAATAGCGCTCACAATCAAGCCACCTTCGAAATCTTGTGCAAGATCTGGAGCAACGTGACTCCAATCGGCGACAATTCATTGGATGACTATGAAATCAACCCCAACCGTAGCCCCAACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAAAATGAAACGATTTTCAGGAATTCCACGGAGAAGAAAACACTGAAACGCTCTCGGCCTCGATCGGCAGTGAAAATCGAGCCAAATGAATTGAGTGCAAAATGA 531 0.4765 MEKKPPPPLDDSQRLFQLLWIDEDEIELLQGFLDYTSQRGSLHHNDIALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNIRNKICFGKEFSFNSAHNQATFEILCKIWSNVTPIGDNSLDDYEINPNRSPNPNLNFSPVILKNETIFRNSTEKKTLKRSRPRSAVKIEPNELSAK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00813 176 Coils Coil 64 84 - -
Gma10g00813 176 PANTHER BNAANNG10740D PROTEIN-RELATED 2 136 IPR007592 GO:0006355
Gma10g00813 176 PANTHER BNAANNG10740D PROTEIN 2 136 - -
Gma10g00813 176 MobiDBLite consensus disorder prediction 152 166 - -
Gma10g00813 176 Pfam Protein of unknown function, DUF573 16 110 IPR007592 GO:0006355
Gma10g00813 176 MobiDBLite consensus disorder prediction 152 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00813 Gma-Chr10 11999051 11999866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00813 7 166 GeBP Transcription Factor Family AT5G28040 53.529 1.33e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma10g00813 DUF573 1.2e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00813 - - gsj:114371408 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00813 10 11999051 11999866 Gma02g01599 02 32568035 32573439 GST
Gma19g01392 19 43216338 43220108 Gma10g00813 10 11999051 11999866 PCT
Gma10g00813 10 11999051 11999866 Gma19g01392 19 43216338 43220108 PCT