Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00810 ATGAGGCAAGCCAGTAAAGATGTGATGCTAGGAAGCATTAATGTTCCTGCTAAGACTCAACTCTTCTTGGCATTGGCTGTTGTTCATCATGACAGAGAAATCCTGGGAGATGATCATAACTTCAATCCAATGAGATTTAGTGAGCCTCGAAAGCATTTGGCCGCATTCTTTCCCATCGGATTAGACCCTAGAATCTGTGTTGGGCAAAATTTGGCAATGCTTGAGGCAAAGATTGCTCTTGCTCTGATCATTCAAAGTTACAATTTTGTGAGGATCTTTCTAGCGCCACATGTACATACCGGAATGGTGAATGAATTGACGACAAGTGTTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCAAAACAAAACGTCATGAAATTGCGTTCAAAGCCTTTCAAAATCCGCGGTTGTACATGGAGGATCCTTGTGTATCCACTGAGGAGGGATGTGAACCATTTTTCAGTGTATTTGATGGTTGCTGATTCTTTACCACCGTACGGATGGAGCAGAAACACGTTTTTCAAGTTAGCTCTAATTAATCAGGTGGATAGGAGCAAGTCCATTGCAAAAGAGACACGCCAAAAGTTCAATGGAGGATATCGTTGCTGGGGTTCATTTTTCTTGAATCTTAGTGATTTCAACAACCCAAAACAAGGGTATCTTGTGAGGAACAAGTGCATAATCGAAGCTCACATTTGTGTCTCCGATTTATCACCTAAGATTCAAGTCCACCCAAATAGTTCTCCAATATTTCATGACTCTCTAAGATGTGGTCAGGCAACAGAATCATCCTCAGATGATAGAGATACCATTAGTCCAAGAACCTCAGGATCTAGTACTGGAGCAGAAGGTGAAACTCATCATCAAGGCTTAAATATTAATTTGATACTAAGAGAAGTACTCGTAGATTTTGAGAGTTTAGGAGCAGAAGAAGAAGCTTTCATTCCACTCTTGGAAGAGGTTTGCATTTGGCACCCTAATCTGATACAGTGCCAAAGGGAAAGGACTAGAAGGTTTAGACAATGGGCCTTTACTTCTTTGGGCCATGTTTTGCATTTTCTCAAGACCAAAAGGGTTAAAGATATCAATGAAGAGGACATAAAGTACCTTCATGGTTTGTGGAAGGAACTTGTCAAGTCCTCAGGGTTTGACCTAACTTGGCTGGAGCCATATGTTCAATCAGCATTGGGTTTGAGGGCTTATATGGAAAGAGCAAACCAATTGAAGAAACTTAAGGACAAGGTGGTTGCTTTGGAGATTAACATGAAGAGGCTCAGAGGGGAACTTGCTGCTGCTGAAGGAGAGTTTGAAGTGGCAAGGAGTGGCTTGTCTGAAGTGAGAAGAGGCTTCAATGAGATGGATGTAAATGCTGCAATTGGTTATGCTATGTTTTAA 1404 0.411 MRQASKDVMLGSINVPAKTQLFLALAVVHHDREILGDDHNFNPMRFSEPRKHLAAFFPIGLDPRICVGQNLAMLEAKIALALIIQSYNFVRIFLAPHVHTGMVNELTTSVDFEKFSWKIEDFSKQNVMKLRSKPFKIRGCTWRILVYPLRRDVNHFSVYLMVADSLPPYGWSRNTFFKLALINQVDRSKSIAKETRQKFNGGYRCWGSFFLNLSDFNNPKQGYLVRNKCIIEAHICVSDLSPKIQVHPNSSPIFHDSLRCGQATESSSDDRDTISPRTSGSSTGAEGETHHQGLNINLILREVLVDFESLGAEEEAFIPLLEEVCIWHPNLIQCQRERTRRFRQWAFTSLGHVLHFLKTKRVKDINEEDIKYLHGLWKELVKSSGFDLTWLEPYVQSALGLRAYMERANQLKKLKDKVVALEINMKRLRGELAAAEGEFEVARSGLSEVRRGFNEMDVNAAIGYAMF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00810 467 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 112 449 - -
Gma10g00810 467 ProSiteProfiles MATH/TRAF domain profile. 112 235 IPR002083 GO:0005515
Gma10g00810 467 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 112 449 - -
Gma10g00810 467 CDD MATH 114 235 IPR002083 GO:0005515
Gma10g00810 467 Coils Coil 404 438 - -
Gma10g00810 467 Pfam MATH domain 120 235 IPR002083 GO:0005515
Gma10g00810 467 Pfam Cytochrome P450 1 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 Gene3D Cytochrome P450 1 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 PRINTS E-class P450 group I signature 24 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 PRINTS E-class P450 group I signature 66 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 PRINTS E-class P450 group I signature 56 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 111 247 IPR008974 GO:0005515
Gma10g00810 467 SMART math_3 114 216 IPR002083 GO:0005515
Gma10g00810 467 SUPERFAMILY TRAF domain-like 114 239 - -
Gma10g00810 467 SUPERFAMILY Cytochrome P450 1 91 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma10g00810 467 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00810 Gma-Chr10 11863855 11868034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00810 2 89 Cytochrome P450 AT1G75130 50.562 1.53e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00810 - - gmx:102664684 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00810 10 11863855 11868034 Gma02g01544 02 30839745 30841316 GST
Gma10g00810 10 11863855 11868034 Gma19g01938 19 48536858 48538460 PCT
Gma10g00810 10 11863855 11868034 Gma03g01897 03 44887745 44889844 PCT