Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00799 ATGGCGGAGTCCCAAGGTGAAGGTGGTGGTGACAGTGGCGCTTCTGGAAGCAGGCGTAGAGGCATTGCTTCCAGGCGCGCCATGGCAGCACAAACACAAGATGAAGCAATGGTGGAATCTTCACCCGCAACACCATGTGGGGCATGCAAGTTCTTGAGGAGGAGGTGCATTGAAGGGTGCATCTTTGCACCCCACTTTGGTAATGACCAGGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTTCGGTGAACCGCCGCAATGAAGCAGTGACAACAATATCATATGAGGCTCAGGCAAGGTTGTCTGATCCAGTTTATGGTTGTGTCTCCACCATCCTTGCTCTGCAACAGCAGGTAGTGGCAACTTTGCAAGCAGAGCTAGCTATGTTGCAAACTCAGCTGATGAATAGTAGGTTTGCCTATGCAAGTGCACTTCAGACCACACAGCTACAACAACCAAATATGAATGCAGGAGCACTACAACCAGCATATTCCAACAACTCATGTGCTTCAACCAACCTTCTGAACTTGAGCAGCTTCAACAATAACACTGGCTTTGACCTTGAAATGGACACAGCACCCTCCTCATCAAGTTTGGAGCCTCTTCAACTCACAAGGTTGCCCCTATGTAAGGAAGAGGATGAAGAAGAAAGCAAGACTCAGCAAGCCTTTAACCATCGTTGA 723 0.4896 MAESQGEGGGDSGASGSRRRGIASRRAMAAQTQDEAMVESSPATPCGACKFLRRRCIEGCIFAPHFGNDQGAAKFAAVHKVFGASNVSKLLSNISVNRRNEAVTTISYEAQARLSDPVYGCVSTILALQQQVVATLQAELAMLQTQLMNSRFAYASALQTTQLQQPNMNAGALQPAYSNNSCASTNLLNLSSFNNNTGFDLEMDTAPSSSSLEPLQLTRLPLCKEEDEEESKTQQAFNHR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00799 240 Pfam Lateral organ boundaries (LOB) domain 45 144 IPR004883 -
Gma10g00799 240 MobiDBLite consensus disorder prediction 1 43 - -
Gma10g00799 240 ProSiteProfiles LOB domain profile. 44 147 IPR004883 -
Gma10g00799 240 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 233 - -
Gma10g00799 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 233 - -
Gma10g00799 240 Coils Coil 126 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00799 Gma-Chr10 11432528 11434756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00799 44 231 AS2 family AT3G03760 60.199 7.37e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma10g00799 LOB 3.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00799 - - gmx:100813769 419.468