Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00798 ATGGGCAACAACTGTGTGGGACCCAACGTCGGCAACGGCTTCCTCCAGTCCGTCACCGCGGCGGTGTGGAAAACGCGCCCGCCGGAGAACCGCCTTCCTCCGCCCAACGCCGAGGCCAAAGCCCCCGGCGGATCCGCGCCTTCCACCGCAACCACAACCACCAACACCGCCGATTCCTCGAAATCACCGGAGCCTCCTCCCGGCATGCCGGTCCAGAGCACACCGCCAGAGCCGGTCAAAATGCCTGCCGCCGCCGCCGACGCTGCGAAACCGCTCCCGCTGAAGCCCGAGAAGCCGGCCTCGAGCCACGCCATGGAGCCGGTCCCCGGCGGCGATAACAACCACCAGACCAAGAAGCCCACCCACTTGAAAAGGGTATCTAGTGTGGGACTTCAAGTGGAATCCGTGTTAGGTCGAAAAACCGAAAACATGAAAGAGTTCTTTAGTTTGGGGCGCAAGTTAGGGCAAGGGCAATTCGGGACAACGTTTTTATGCGTCCAAAAGGGCACAAACAAAGACTTCGCTTGCAAATCAATCGCAAAGCGCAAATTGACAACGCAGGAGGatgtggaagatgtaaggagggagattcaaatcatgcaccacttggcgggtcaccccaatgtgatacaaattgttggggcttatgaggatgctgtggctgtgcatgttgtcatggagctttgtgctggaggagagttgtttgataggatcattcaaagggggcattacactgagagaaaggctgctgaacttgctaggctgattcttaatgttgtggaggcttgtcattctcttggggtcatgcatagggatttgaagcctgagaattttttgtttattaatcatgaggaggagtcacctcttaagaccattgattttggactctctgtgttctttagaccagGTGAAACATTCACTGATGTGGTTGGGAGCCCATACTACGTGGCCCCTGAAGTTTTGCGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTATATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAACTTGACTTCATTTCTGAACCCTGGCCTAGCATATCTGAAAGTGCAAAGGATCTTGTTCGGAGGATGCTTATAAGGGACCCTAAGAAGCGGATGACAGCACATGAAGTTCTTTgccacccatgggttcaggttggaggtgttgcacctgataaaccacttgattctgctgtcttgactcgtttgaagcaattctctgcaatgaacaagctcaaaaaaatagccattagaGTAATTGCTGAAAACCTGTCTGAGGAAGAAATTGCAGGACTGAAAGAAATGTTCAAGATGATAGACACGGATAACAGCGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTACTTGGCTAATGGAAGCAGCAGACGTGGATAACAGTGGTACCATAGACTATGGTGAATTCTTAGCAGCTATGCTTCATCTAAACAAGATCCAGAAGGAGGATCATCTATATGCTGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACAAAAGATGAGCTCCAACAAGCCTGCGAACAGTTCGGCCTAAAGGATTATCATCTAGATGATATAATATGTGAAATTGACAAAGATAATGATGGACGCATTGATTACAGCGAGTTTGCAGCAATGATGCAAGACACTGATTTTGGCAAAATGGGGGAGAGGAAGCTTCAATGGCCTGCTAAACATAGTGTTTATAGCCCTAACCTGAGCTCTCTCGCCGCCGTCGCAGGTGGTTTTCTTCCTCTCCAGTGTAGGTATCCCTCTTCTCAGGAACAGTGA 1902 0.3791 MGNNCVGPNVGNGFLQSVTAAVWKTRPPENRLPPPNAEAKAPGGSAPSTATTTTNTADSSKSPEPPPGMPVQSTPPEPVKMPAAAADAAKPLPLKPEKPASSHAMEPVPGGDNNHQTKKPTHLKRVSSVGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILNVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEITWLMEAADVDNSGTIDYGEFLAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITKDELQQACEQFGLKDYHLDDIICEIDKDNDGRIDYSEFAAMMQDTDFGKMGERKLQWPAKHSVYSPNLSSLAAVAGGFLPLQCRYPSSQEQ 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00798 633 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Gma10g00798 633 SMART efh_1 525 553 IPR002048 GO:0005509
Gma10g00798 633 SMART efh_1 559 587 IPR002048 GO:0005509
Gma10g00798 633 SMART efh_1 453 481 IPR002048 GO:0005509
Gma10g00798 633 SMART efh_1 489 517 IPR002048 GO:0005509
Gma10g00798 633 ProSiteProfiles Protein kinase domain profile. 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00798 633 SUPERFAMILY EF-hand 445 585 IPR011992 -
Gma10g00798 633 Gene3D Phosphorylase Kinase; domain 1 150 233 - -
Gma10g00798 633 ProSiteProfiles EF-hand calcium-binding domain profile. 521 556 IPR002048 GO:0005509
Gma10g00798 633 CDD STKc_CAMK 147 405 - -
Gma10g00798 633 MobiDBLite consensus disorder prediction 21 127 - -
Gma10g00798 633 MobiDBLite consensus disorder prediction 45 62 - -
Gma10g00798 633 ProSitePatterns EF-hand calcium-binding domain. 568 580 IPR018247 -
Gma10g00798 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Gma10g00798 633 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Gma10g00798 633 Gene3D - 413 589 - -
Gma10g00798 633 Gene3D Transferase(Phosphotransferase) domain 1 234 410 - -
Gma10g00798 633 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Gma10g00798 633 CDD EFh 454 514 IPR002048 GO:0005509
Gma10g00798 633 ProSiteProfiles EF-hand calcium-binding domain profile. 449 484 IPR002048 GO:0005509
Gma10g00798 633 Pfam Protein kinase domain 149 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00798 633 MobiDBLite consensus disorder prediction 63 77 - -
Gma10g00798 633 Pfam EF-hand domain pair 524 585 IPR002048 GO:0005509
Gma10g00798 633 Pfam EF-hand domain pair 454 514 IPR002048 GO:0005509
Gma10g00798 633 SMART serkin_6 148 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00798 633 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 87 593 - -
Gma10g00798 633 ProSitePatterns EF-hand calcium-binding domain. 534 546 IPR018247 -
Gma10g00798 633 ProSiteProfiles EF-hand calcium-binding domain profile. 559 590 IPR002048 GO:0005509
Gma10g00798 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 87 593 - -
Gma10g00798 633 SUPERFAMILY Protein kinase-like (PK-like) 148 407 IPR011009 -
Gma10g00798 633 ProSitePatterns Protein kinases ATP-binding region signature. 154 181 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00798 Gma-Chr10 11409234 11419112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00798 1 593 EF-hand Containing Proteins AT2G38910 72.879 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma10g00798 Pkinase 3.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00798 K13412 - gmx:100813232 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00798 10 11409234 11419112 Gma10g00798 10 11409234 11419112 ECH