Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00796 ATGGAGAAAGCAAATACATCACTAGTGAGAACAAAATCAGACCAACTATTAGAATTAATGGTGGCAGGCTTAAAGTCGCCACCATCGAGCGATCACTCCGCGAACGGAGTGGTGGACTCGAGGAAGTCAAGCCGATGGCTGACGGGGGCCTCGCCGGGGCGCGGCGGGAAGAACACCCACATAAGAAAGTCAAGGAGTGCTCAGATAAGTCAAATGAAGCTAGAGCTCGATGATGTGAGTAGTGGTGCTGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCTTTCTCCTTCACTGGCTTTACTATGCCTCCTGAAGAAATTGCTGACTCCAAGCCCTTCAGTGATGATGATATCCCTGAGGATATTGAAGCTGGACCTAGGACGAAGTTTCAAACGGAACCAACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAGGGGATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGCCCCTCGGGAAGTGGAAAGACAACTCTTTTAAACCTTCTTGGGGGAAGGTTAAGCCATCCTATAAGTGGTGGTTCTATCACTTACAATGACCAACCATATTCCAAGTTCCTTAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATATGCAGCCAGGCTAAGACTACCAAAGGCATACACAAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAAAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAAGACATAGCAGAAGCAGGGAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTCCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCCTTCTTTACTTTGGAAAAGCCTCAGAAGCAATGACTTACTTCCAGTCCATAGGATGTTCACCACTTATTTCCATGAACCCGGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAAGTGCAGATGGGAAATGCAGAAGCTGAAACACAAAATGGGAAGCCATCACCAGCTGTTGTACATGAGTATCTGGTGGAGGCATATGAAACTCGAGTAGCAGAAACAGAAAAGAAAAGACTAATGGTTCCTATACCTCTTGATGAAGCACTGAAGACTAAAGTGTATTCTCATAAGAGACAATGGGGAGCAAGTTGGGATGAGCAATTTTCCATACTATTTTGGAGAGGAATCAAAGAACGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCTGTCATCTTAGGATTACTTTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGATTACTATTCTTTATTGCTGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGACATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAGTGCTTTTTCTACTTGTTGTTTATTTCATGGCCGGCCTCAGACTCAGTGTTGCACCATTTTTCCTCACGGTTCTCACTGTTTTCCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGGGCCACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGGGTCCCCATATTTTTTTCTTGGATTCGTTACATGTCATTCAACTACCACACCTACAAGCTTCTTCTCAAGGTGCAATATGAACACATCTCACCAGTCATCAATGGGATCAGAATTGATAGTGGTGCAACAGAGGTAGCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGAGAATGAAACTTCAATCTGGAGCTTAA 2217 0.438 MEKANTSLVRTKSDQLLELMVAGLKSPPSSDHSANGVVDSRKSSRWLTGASPGRGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKAYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETQNGKPSPAVVHEYLVEAYETRVAETEKKRLMVPIPLDEALKTKVYSHKRQWGASWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTVLTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGIRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGA 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00796 738 MobiDBLite consensus disorder prediction 22 64 - -
Gma10g00796 738 Pfam ABC transporter 165 316 IPR003439 GO:0005524
Gma10g00796 738 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 732 - -
Gma10g00796 738 ProSitePatterns ABC transporters family signature. 288 302 IPR017871 GO:0005524
Gma10g00796 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 380 IPR027417 -
Gma10g00796 738 CDD ABCG_EPDR 139 370 - -
Gma10g00796 738 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 19 732 - -
Gma10g00796 738 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 142 388 IPR003439 GO:0005524
Gma10g00796 738 MobiDBLite consensus disorder prediction 28 47 - -
Gma10g00796 738 Pfam ABC-2 type transporter 483 692 IPR013525 GO:0016020|GO:0140359
Gma10g00796 738 Gene3D - 141 382 IPR027417 -
Gma10g00796 738 SMART AAA_5 174 365 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00796 Gma-Chr10 11370733 11382047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00796 164 402 Calmodulin-binding Proteins AT2G36910 30.204 1.32e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00796 K05681 - gmx:100800934 1403.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00796 10 11370733 11382047 Gma10g00796 10 11370733 11382047 ECH
Gma19g01923 19 48424994 48434155 Gma10g00796 10 11370733 11382047 PCT
Gma03g01883 03 44781089 44789880 Gma10g00796 10 11370733 11382047 PCT
Gma10g00796 10 11370733 11382047 Gma19g01923 19 48424994 48434155 PCT
Gma10g00796 10 11370733 11382047 Gma03g01883 03 44781089 44789880 PCT