Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00765 ATGGCTGCTTCAACTTCAACTGCTACTTCCTCCCTTATCTGCAACATTTCACTCACCTTTAACTTCCCACACACACTCATACCCTCGAAACCCCTCAACCTCAACCCCCAACTATTCTTTGCTTCTCCCCTCTCACTCTCACTTTACCATTTCCCCCTCTCTTCACTTTCCTTCCAAGACACTCAAAAACCCCTTCAACGCGAAACCTTCCAAAAACCAGAGCCGAATGCGTCACATACAAACCAATCCTCCAGACTCTTTGTGGGAAACTTGCCTTACTCATTGCTCTCTTCCCAGTTGGCTCAGCGGTTCGGAGAGGCTGGCAATGTTGTATCCGTGGAGATTGTGTATGATGACATCATGGATAGAAGTAGAGGGTTTGCGTTTGTTACAATGGGGAGCATGGAGGATGCTGAACGAGCGATTCGAATGTTTGATGGCTCTGAAATTGGAGGTAGAGTTATGAAGGTAAACTTCACAGCGATACCCAAAAGAGGCAAACGGCTAGTAATGGGTTCAAACTATAGAGGCTTTGTAGACAGCCCTCACAAGATTTATGCTGGAAACCTTGGTTGGGGTCTGACTTCACAAGATCTTAGGGATGCCTTTGCTGAGCAGCCTGGCTTCCTGAGTGCCAAGGTCATCTATGAAAGGAACAGTGGAAGGTCTAGGGGATATGGGTTTGTCTCTTTTGAAACTGCTGAGGATGTAGAGGCTGCTTTGAATTCTATGAATGGTGTGGAGGTTCAAGGTCGGCCCTTACGGCTGAATCTAGCTACAGATAAGAATACTTCATCTCCTCTGGCCAACAAGATTAGTAGCATGCTGGAGTTATCATTGTTGTTGGATATCCTCCTTGATGTCCCTTCTATCAAGCTTGGTTTGTTGAAAAAGACAAGGACGAAAACCTCTTGGAAGACAATCCTCCTTACCATCAGAAACAAGATAACTTTGTTAATTGTCACCATTGCCATCGAGTACAAAAACCTCTTGGAAGATGATCCTTTATCTTCATTAATAAGGTCTTGTTCAATTAAAGGAGATTGGGTGTGA 1053 0.4473 MAASTSTATSSLICNISLTFNFPHTLIPSKPLNLNPQLFFASPLSLSLYHFPLSSLSFQDTQKPLQRETFQKPEPNASHTNQSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDDIMDRSRGFAFVTMGSMEDAERAIRMFDGSEIGGRVMKVNFTAIPKRGKRLVMGSNYRGFVDSPHKIYAGNLGWGLTSQDLRDAFAEQPGFLSAKVIYERNSGRSRGYGFVSFETAEDVEAALNSMNGVEVQGRPLRLNLATDKNTSSPLANKISSMLELSLLLDILLDVPSIKLGLLKKTRTKTSWKTILLTIRNKITLLIVTIAIEYKNLLEDDPLSSLIRSCSIKGDWV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00765 350 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 183 261 IPR000504 GO:0003723
Gma10g00765 350 SUPERFAMILY RNA-binding domain, RBD 74 160 IPR035979 GO:0003676
Gma10g00765 350 SMART rrm1_1 85 158 IPR000504 GO:0003723
Gma10g00765 350 SMART rrm1_1 184 257 IPR000504 GO:0003723
Gma10g00765 350 Gene3D - 172 269 IPR012677 -
Gma10g00765 350 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 1 270 - -
Gma10g00765 350 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 86 156 IPR000504 GO:0003723
Gma10g00765 350 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 255 IPR000504 GO:0003723
Gma10g00765 350 SUPERFAMILY RNA-binding domain, RBD 180 267 IPR035979 GO:0003676
Gma10g00765 350 Gene3D - 54 169 IPR012677 -
Gma10g00765 350 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 84 162 IPR000504 GO:0003723
Gma10g00765 350 PANTHER OS02G0815200 PROTEIN 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00765 Gma-Chr10 10158899 10164037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00765 76 287 Eukaryotic Initiation Factors Gene Family AT3G16380 25.352 1.15e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00765 - - gmx:100789843 528.094