Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00764 ATGAACGACTTGTTCTCAGGTTCCTTCTCTCGCTTCCGCAGCGACCAGTCATCCCCGGACCGCCACCACGACATCGAGATGGGCGCCGCCGCCGGTGGCCCCCGCGGCGGCGAGGTGAACCTCGACAAGTTCTTCGAGGACGTGGAAGGCGTGAATGAGGAACTAAAGGAATTAGAAGGCTTAGCGCAGAGTTTAAGAAGCAGCCACGAGCAGAGCAAGACGCTGCACAACGCGAAGGCGGTGAGGGACCTGCGGTCAGGCATGGACGGCGACGTTTCGGCGGCGCTGAAGAAGGCGAAGCTGATCAAGCTGAAGCTCGAGGCGCTGGAGCGGTCCAATGCCGCGAACCGTAACTTGCCTGGATGTGGACCGGGTTCGTCCTCGGACCGGACCCGGACCTCCGTGGTCAACGGTTTGAAGAAGAAGCTGAAGGATTCGATGGAGAGTTTCAACGAGATTCGCGGGCTTGTTTCGTCGGAGTACCGCGAGACCGTGCAGCGGCGGTACTTCACCGTCACCGGCGAGAATCCCGATGATAAGACGCTCGATCTCTTGATCTCCACCGGTGAGAGTGAGACCTTCCTTCAGAAAGCCATTCAAGAGCAAGGCAGGGGTAGAATTCTGGACACCATCAATGAGATTCAAGAGAGGCATGATGCCGTCAAAGAGATAGAAAAGAATCTCAAGGAGTTGCACCAAGTGTTCCTTGACATGACAGTGCTGGTGCAACATCAAGGAGAGCAGTTGGATGATATCGAGAGCCATGTGGCAAGAGCTCATTCTTTTGTGCGCACCGGAGCCGAGCAGTTGCAGACTGCGCGAAAGTACCAGAAAAATACCAGGAAATGGACCTGCTACTGTATCATACTTCTTCTGGTGATCATCTTCTTTGTGGTGCTCTTCACTGTGAGGCCGTGGAAAAATAACAGTAGTGGTGGCGGCAATAATGCATGGGTGAGAGAAAAATGGATTGGCTTAAGACTTGGGAGGAAATCTGTTAGGGTGACCAGCAGTTTCATTTCAATCTGGGGGAAGGGAATGGTTGGTTGTTCTGTCGAGTCATTTCTCTTCTCTTCTTTTCACTATCCATTGATTAAGCAGTCCCAATCATCAACCTTGGATACTCTGCATACCATTCCATTATGCTTAATAGGAACATTCTCCCATCACCACTCACGTACACCTAAATTCTACATTGCAGCTTGCAGCTCAAACCCTAAAATGAATGACTTGTTCTCTGGCTCCTTCTCCCGCAACAACGACCAAGTCTTGCCTGACCACCACCACCATGTGATCGAGATGGCGGCCGCGTCATCACCAACAGCCGAGGGCAGCGCGAACCTTGAAAAGTTCTTTCAAGAAGTTGAGCAGGTGAAAGAGGACCTGAAGGAGCTGGAGCGTCTCCATGAGAATCTACGTGGGAACCACGAGAAGAGCAAGACCCTTCACAGCGCGAAGGCTGTGAAGGAGCTTCGCTCACGCATGGATGCTGATGTGGCACTCGCTTTAAAGAAAGCGAAGCTCGTCAAGGTCCGGCTCGAGACGCTGGACCGGTCCAATCAGGTGAGCCGAAACTTGCCTGGTTTGGAACCTGGTTCGTCCTCGGACCGGACCAGAACGTCTGTGGTGAGCGGACTGAGGAAGAAGCTGAAGGACTCTATGGACAGCTTCAACAGCCTCAGACAACAGATATCATCGGAGTACAGGGAAACCGTGCAGCGTAGATATTATACGGTCACCGGAGAGAATCCCGATGACAAAACCATTGACCTCCTCATTTCTACTGGTGAGAGTGAAACATTCTTGCAGAAAGCGATCGAGCAGCAAGGTAGAGCCAGCGTGATGGACACAATCCAAGAGATTCAAGAGAGGCACGACACAGTCAAGGAAATAGAGAGAAACCTAAACGAGCTTCACCAAGTGTTCTTGGACATGGCCGTGTTGGTGCAATCCCAGGGAGAACAATTGGACGACATCGAAAGCCACGTGGCACGCGCCAATTCATACGTGCGGGGTGGGGTCCAGCAGCTGCACGTGGCAAGGAAGCACCAAAAGAACACCCGAAAGTGGACATGCATAGCCATCATATTGCTCATTATTATCATCTTGATCATAGTCCTCCCTATAGTTCTAAGAAAATGA 2142 0.5201 MNDLFSGSFSRFRSDQSSPDRHHDIEMGAAAGGPRGGEVNLDKFFEDVEGVNEELKELEGLAQSLRSSHEQSKTLHNAKAVRDLRSGMDGDVSAALKKAKLIKLKLEALERSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLKDSMESFNEIRGLVSSEYRETVQRRYFTVTGENPDDKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEIEKNLKELHQVFLDMTVLVQHQGEQLDDIESHVARAHSFVRTGAEQLQTARKYQKNTRKWTCYCIILLLVIIFFVVLFTVRPWKNNSSGGGNNAWVREKWIGLRLGRKSVRVTSSFISIWGKGMVGCSVESFLFSSFHYPLIKQSQSSTLDTLHTIPLCLIGTFSHHHSRTPKFYIAACSSNPKMNDLFSGSFSRNNDQVLPDHHHHVIEMAAASSPTAEGSANLEKFFQEVEQVKEDLKELERLHENLRGNHEKSKTLHSAKAVKELRSRMDADVALALKKAKLVKVRLETLDRSNQVSRNLPGLEPGSSSDRTRTSVVSGLRKKLKDSMDSFNSLRQQISSEYRETVQRRYYTVTGENPDDKTIDLLISTGESETFLQKAIEQQGRASVMDTIQEIQERHDTVKEIERNLNELHQVFLDMAVLVQSQGEQLDDIESHVARANSYVRGGVQQLHVARKHQKNTRKWTCIAIILLIIIILIIVLPIVLRK 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00764 713 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 8 311 - -
Gma10g00764 713 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 419 708 - -
Gma10g00764 713 Pfam SNARE domain 654 706 IPR000727 -
Gma10g00764 713 Pfam SNARE domain 247 299 IPR000727 -
Gma10g00764 713 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 618 680 IPR000727 -
Gma10g00764 713 CDD SNARE_syntaxin1-like 210 272 - -
Gma10g00764 713 SUPERFAMILY t-snare proteins 39 266 IPR010989 GO:0016020|GO:0016192
Gma10g00764 713 Coils Coil 211 231 - -
Gma10g00764 713 MobiDBLite consensus disorder prediction 522 541 - -
Gma10g00764 713 MobiDBLite consensus disorder prediction 1 38 - -
Gma10g00764 713 CDD SynN 41 198 IPR006011 GO:0016020
Gma10g00764 713 SMART SynN_4 36 162 IPR006011 GO:0016020
Gma10g00764 713 SMART SynN_4 443 569 IPR006011 GO:0016020
Gma10g00764 713 CDD SNARE_syntaxin1-like 617 677 - -
Gma10g00764 713 Gene3D - 38 170 - -
Gma10g00764 713 Gene3D - 445 578 - -
Gma10g00764 713 Coils Coil 448 482 - -
Gma10g00764 713 ProSitePatterns Syntaxin / epimorphin family signature. 217 256 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma10g00764 713 PANTHER SYNTAXIN 8 311 IPR045242 -
Gma10g00764 713 PANTHER SYNTAXIN 419 708 IPR045242 -
Gma10g00764 713 SUPERFAMILY t-snare proteins 447 673 IPR010989 GO:0016020|GO:0016192
Gma10g00764 713 ProSitePatterns Syntaxin / epimorphin family signature. 624 663 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma10g00764 713 Gene3D - 609 711 - -
Gma10g00764 713 Gene3D - 208 304 - -
Gma10g00764 713 Pfam Syntaxin 43 246 IPR006011 GO:0016020
Gma10g00764 713 Pfam Syntaxin 450 653 IPR006011 GO:0016020
Gma10g00764 713 SMART tSNARE_6 613 680 IPR000727 -
Gma10g00764 713 SMART tSNARE_6 206 273 IPR000727 -
Gma10g00764 713 CDD SynN 448 605 IPR006011 GO:0016020
Gma10g00764 713 Coils Coil 41 68 - -
Gma10g00764 713 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 211 273 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00764 Gma-Chr10 10143545 10151087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00764 437 692 SNARE and Associated Proteins AT3G11820 71.875 3.61e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00764 K08486 - gmx:100789318 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00764 10 10143545 10151087 Gma10g00764 10 10143545 10151087 ECH
Gma10g00764 10 10143545 10151087 Gma02g01844 02 42590364 42593274 GST