Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00756 ATGGTAAACATTCTAAGACATCATGGGATAACACAACAAGGGGTGAATGTTTCACTTCATGTCCTGTTGGGAGCCTCTTCGATGACACGACACAAAATCATGATGGTGGAAGTTGGTTTAGTTCATGAACTCGTTGAGATTGAACTAATAGTAGCAGAGAAGAGAATCACGGAACTAACACTAGAGACGTTGAGAGTGGGGACTGTGGCGAAGCTTTGCATGGTGCTTCAGGTTGATCATGCAAAGTATTTAAAGGACAAAGTGATGGAGATTCTCAAGTGGCACTCTGAGGTTTAG 297 0.4276 MVNILRHHGITQQGVNVSLHVLLGASSMTRHKIMMVEVGLVHELVEIELIVAEKRITELTLETLRVGTVAKLCMVLQVDHAKYLKDKVMEILKWHSEV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00756 98 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 2 64 - -
Gma10g00756 98 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 62 97 - -
Gma10g00756 98 PANTHER WDSAM1 PROTEIN 62 97 IPR045185 GO:0061630
Gma10g00756 98 PANTHER WDSAM1 PROTEIN 2 64 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00756 Gma-Chr10 9932148 9932621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00756 5 73 U-box Gene Family AT3G11840 40.000 8.51e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00756 - - gmx:100798446 103.99