Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00754 ATGGCGACATATTTTCATAGTAACTCGGAAATTCAAGCTGGTGCTGACGGCCTTCAAACCCTCGTACTAATGAACCCCGGGTATGTCCAATACTCTGACACGCCGCCACCACCGCACGGCGGAAACCTCGTATTCCTCAACTCCGCCGCCGGAAACGCCTCCCTACAAAGTCTCCCCCACGCGCCGCCCCCCCACACGCAGCAATTTGTCGGTGTCCCACTCTCGGCCGCCGCGCATGAGCCGCCGGCGTCCATGCACCACGACGTCTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTATAACCTCTGGAACACAATTGAGCACAACGCGGCGGCGCGTGAGGCCCCACGCGCCACCCAGGGGCTGTCGCTGAGTCTGCACGGGGACCACATGCGCGCGTCACCGTCCTCGGCTTCCGGGGCCTCCAACGGCGGCGGCGTGGCGGGGATTCAGAGCGTGCTGTTAAGCTCCAAGTACTTGAAGGCCACGCAGGAGCTTCTGGATGAGGTTGTTAATGTTAACGGCGGAATTAGGGTTGAACACGCGAAGAAGCTGAACTTCGAAAAAACTAAGGTTGTTGGAGAATCATCAACCGCCGCTAGTGGCGACGGTTCCGTTGGTGGAGAGGGAAGTGGGAAACGTAGCTCTGAGTTGTCAACTACGGAGAGACAAGAAATTCAGATAAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAACCAGATGAAGATAGTGATATCCTCATTTGAGCAAGCTGCTGGAATAGGCTCAGCAAGAACGTACACTGCGCTTGCACTGCAAACAATTTCGAAGCAATTTCGGTGTTTGAAGGATGCAATAACGGGGCAAATCAGAGCTGCAAACAAGAGTTTGGGAGAAGAGGATTGTTTTGGTGCTAAAATTGAAGGATCTAGGCTCAAATATGTGGACCATCATCTAAGGCAACAGAGGGCTATTCAGCAACTGGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCGGTTTCTGTTCTGCGTGCTTGGCTCTTTGAACACTTTCTTCATCCTTACCCCAAGGACTCAGACAAGCACATGCTTGCTAAACAAACAGGGCTTACCAGGAGCCAGGTTTCAAATTGGTTCATTAATGCTAGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGAGCATGAACTAAATGGTTCTGAGGAGAAATCAAGCAAGAGTGGTGAAGATCCTGCTACAAAAACCACAAGTCCACAAGAGAAACGTACTTCCTCTGAAATTGAATCCAAAAGTTTCAATTCCAAACAAGATGTTTCCAAACAAAGCCAGAACACTCCAATTCTTCCAACTTCTCCACCATCAATATCACCTATAGGGGGAAGTGTTAAGAACCAATCAGGATTCAGTTTCATGGGGTCATCAGAACTTGATGGAATCACACAAGGAAGTCCTAAAAAACCAAGGAACCATGAAATTCTTCACTCTCCAAACCGTGTCCCTTCAATCAACATGGATGTGAAAGCCAATGAAGGAAACAATGAGCAACAACTCTCAATGGATCACGAGAGGCAGAATAATAGGGATAGCTACTCCTTCATGGGGAACCAAACAAACTTCATTAGTGGCTTTGGACAATACCCTATTGAGGAAATTGGAACACACCAAAGTTTTCTCCCAAACCAAAACATTCAACTTGGAAGAGGGTTGGACATTGGTGAACCAAACCAGTTTGGTGCCTTGAACAATTCCAATTCTCACAATTCAGCAGCATTTGAGAGTATCAACATGCAGAACCCGAAGAGGTTTGCTGCACAATTGCTACCAGACTTTGTGGCCTAA 1893 0.4892 MATYFHSNSEIQAGADGLQTLVLMNPGYVQYSDTPPPPHGGNLVFLNSAAGNASLQSLPHAPPPHTQQFVGVPLSAAAHEPPASMHHDVSALHGFLPRMQYNLWNTIEHNAAAREAPRATQGLSLSLHGDHMRASPSSASGASNGGGVAGIQSVLLSSKYLKATQELLDEVVNVNGGIRVEHAKKLNFEKTKVVGESSTAASGDGSVGGEGSGKRSSELSTTERQEIQIKKAKLINMLDEVEQRYRQYHNQMKIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEDCFGAKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNGSEEKSSKSGEDPATKTTSPQEKRTSSEIESKSFNSKQDVSKQSQNTPILPTSPPSISPIGGSVKNQSGFSFMGSSELDGITQGSPKKPRNHEILHSPNRVPSINMDVKANEGNNEQQLSMDHERQNNRDSYSFMGNQTNFISGFGQYPIEEIGTHQSFLPNQNIQLGRGLDIGEPNQFGALNNSNSHNSAAFESINMQNPKRFAAQLLPDFVA 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00754 630 MobiDBLite consensus disorder prediction 413 522 - -
Gma10g00754 630 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 6 531 - -
Gma10g00754 630 MobiDBLite consensus disorder prediction 447 498 - -
Gma10g00754 630 ProSiteProfiles 'Homeobox' domain profile. 337 400 IPR001356 GO:0003677
Gma10g00754 630 SMART HOX_1 340 404 IPR001356 GO:0003677
Gma10g00754 630 Pfam Associated with HOX 154 291 IPR006563 -
Gma10g00754 630 MobiDBLite consensus disorder prediction 194 224 - -
Gma10g00754 630 SUPERFAMILY Homeodomain-like 341 407 IPR009057 -
Gma10g00754 630 MobiDBLite consensus disorder prediction 413 427 - -
Gma10g00754 630 Pfam Homeobox KN domain 357 396 IPR008422 GO:0003677|GO:0006355
Gma10g00754 630 SMART prehox3 149 292 IPR006563 -
Gma10g00754 630 Gene3D - 336 413 - -
Gma10g00754 630 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 6 531 - -
Gma10g00754 630 CDD homeodomain 340 401 IPR001356 GO:0003677
Gma10g00754 630 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00754 Gma-Chr10 9877298 9881619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00754 1 630 Homeobox Transcription Factor Family AT2G35940 46.605 1.28e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma10g00754 POX 9.8e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00754 - - gmx:100791773 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00754 10 9877298 9881619 Gma10g00754 10 9877298 9881619 ECH
Gma10g00754 10 9877298 9881619 Gma02g00058 02 709311 711484 GST
Gma03g01860 03 44572236 44574980 Gma10g00754 10 9877298 9881619 PCT
Gma10g00754 10 9877298 9881619 Gma03g01860 03 44572236 44574980 PCT