Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00750 ATGATGAGGCTGAACTTTCTCCTTTGTTTCTGTTTCTTCACTCTCGTCGTTTCCGAAACCGACCCGAACGACGTGAAGATTCTAAACACTTTCAGAAGAGGGTTGAACAACTCAGAGCTCTTACCATGGCCCGAAGAAGGAGGAGACCCGTGCGGGAGCCCACCGTGGAAATACATCTTCTGCAACGGCAACAGAGTCGCTCAAATTCAGACCAAGAACCTGGGTCTGGTGGGCCCACTTCCTCAAAACCTCAACCAACTCGTCATGCTCGAGAATCTGGGCTTACAGAACAACAACCTCAACGGTCCCTTGCCTTCCTTCAAGGGCTTAAATAACCTTAAATACATTTTTCTCGGTCGCAACGACTTCGATTCAATCCCTTTAGATTTCTTCGAGGGACTGAAGAGTCTCGAGGTCTTGGCTTTGGATTACAACGAGAAGCTTAATGCAAGTAGTGGCGGCTGGAGTTTTCCGGCAGCGTTGGCGGATTCGGCGCAGCTGAGGAACTTGAGTTGCATGAGCTGTAATCTGGTGGGCCCCATTCCGGGGTTCCTCGGGGACATGGCGTCGCTGTCGGTGTTGCTGCTGTCGGGAAACAACTTAACCGGCGAGATTCCGGCGACGCTGAACGCCGTGCCGGCGTTGCAGGTTTTGTGGCTGAACAACCAGCGTGGTGAGGGACTCACTGGGAAGATTGATGTCTTGGCGAGTATGATTTCGTTGACGAGTTTGTGGCTTCACGGGAATAAGTTTGAAGGGAGTGTGCCAGATAGTATTGCGGATTTGGTTTCTCTAAAGGATTTGGATCTCAACGGGAATGAGTTTGTTGGGTTGATTCCGAGTGGTTTGGGTGGAATGAAGTTGGATAGATTGGATTTGAATAACAACCATTTCGTGGGTCCGATCCCGGATTTCGCAGCGAGTAAAGTGAGCTTTGAGAACAATGAATTTTGTGTGGCCAAACCCGGGGTTATGTGTGGTTTTGAGGTGATGGTGTTGTTGGAGTTTCTTGGAGGGTTGGGGTATCCTCGGATTTTGGTTGATGAGTGGAGTGGGAATGACCCTTGTGATGGGCCATGGTTGGGGATAAGGTGCAATGGGGATGGGAAGGTGGACATGATTCTTTTGGAAAAGTTTAATATTAGTGGGACTTTGAGTCCTTCTGTTGCAAAGTTGGATTCTCTTGTTGAGATAAGGTTGGGAGGTAATGATATCAGTGGTGGGATACCTAGTAATTGGACTAGTTTGAGATCTTTGACATTGTTGGATCTGAGTGGGAACAACATTTCAGGTCCCTTGCCGAGTTTTAGGAAAGGGTTGAAGCTTGTGATTGATGAGAATCCTCATGTAAGTGCTCCAGAAGGTTCTCTTCCTTCACCAGTGAGTAGTTCGGGTTCCGGTTCGGGTTCGTGGTCTACGAAGGGTGAATCTCCTCCAGCTGATAAGCATAATCCTAATCCATCTGGAGATTCTAGTCCTAATCCAAAGTCTAGTAGTTCTTTTGAGTCGAATAAGTCTTCCATTGGGAAAAAATTGGTTCCAATTGTGGCTCCTATCGCAGGTGTTGCAGCTGTGGCTTTTGTGCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAAAAAGGGTGTCTCTGAGGGTCCAGGGTCATTGGTGATTCACCCTAGGGATGCTTCTGATCTGGACAATGTGCTGAAGATTGTTGTTGCTAACAACAGCAATGGGAGCGTTTCCACAGTGACTGGCAGTGGGTCTGGGATTACGACTGGAAGTAGCGAGTCTCGTGTTATTGAAGCTGGGAACCTGGTGATATCGGTTCAGGTTCTTCGAAATGTGACCAAGAATTTTGCGCGGGAGAACGAGGTTGGACGCGGTGGATTTGGGGTTGTTTACAAGGGGGAATTGGAAGATGGGACTAAGATTGCGGTAAAACGAATGGAATCCGGTGTGATTACGAGCAAGGCCTTGGATGAATTCCAGTCTGAGATTGCTGTTCTATCTAAAGTCCGGCACCGGCATTTGGTGTCTCTTTTGGGTTATTCAGTTGAAGGTAATGAAAGGATTCTAGTTTATGAGTATATGCCACAAGGGGCTCTTAGTATGCATCTTTTCCATTGGAAGAGCTTAAAACTGGAGccactgtcttggaagaggaggctcaacattgccttggatgttgctagaggaatggagtatcttcatagtctggctcaccaaatcttcattcacagagatcttaagtcatcaaatattttgcttggggatgattttagagcaaaagtctcagactttgggttggtaaaacttgctcctgatggcaaaaaatctgtagtgaccaggcttgctggtacatttggatacttggcaccggaaTATGCagTGACAGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGTGTTGTCCTAATGGAGCTGCTAACTGGATTAATGGCACTTGACGAGGATCGACCCGAGGAAACCCAATACTTGGCGTCGTGGTTCTGGCATATAAAATCAGACAAGGAGAAACTAATGTCTGCTATTGACCCGGCCCTCGACATAAAGGAAGAAATGTTTGACGTTGTCTCCATCATTGCTGAGCTAGCTGGGCACTGCTCTGCCAGAGAACCAAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTTCACCGCTTGTTCAAAAATGGAAACCATTAGATGATGAGACTGAGGAGTATTCCGGCATAGATTACAGTCTTCCCCTAAACCAAATGGTGAAGGATTGGCAGGAGACAGAAGGAAAGGACTTAAGCTATGTGGACCTACAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGGTTTGCCGAGTCTTTCACTTCTGTCGATGGCCGGTGA 2886 0.4342 MMRLNFLLCFCFFTLVVSETDPNDVKILNTFRRGLNNSELLPWPEEGGDPCGSPPWKYIFCNGNRVAQIQTKNLGLVGPLPQNLNQLVMLENLGLQNNNLNGPLPSFKGLNNLKYIFLGRNDFDSIPLDFFEGLKSLEVLALDYNEKLNASSGGWSFPAALADSAQLRNLSCMSCNLVGPIPGFLGDMASLSVLLLSGNNLTGEIPATLNAVPALQVLWLNNQRGEGLTGKIDVLASMISLTSLWLHGNKFEGSVPDSIADLVSLKDLDLNGNEFVGLIPSGLGGMKLDRLDLNNNHFVGPIPDFAASKVSFENNEFCVAKPGVMCGFEVMVLLEFLGGLGYPRILVDEWSGNDPCDGPWLGIRCNGDGKVDMILLEKFNISGTLSPSVAKLDSLVEIRLGGNDISGGIPSNWTSLRSLTLLDLSGNNISGPLPSFRKGLKLVIDENPHVSAPEGSLPSPVSSSGSGSGSWSTKGESPPADKHNPNPSGDSSPNPKSSSSFESNKSSIGKKLVPIVAPIAGVAAVAFVLIPLYVYCFRKKKGVSEGPGSLVIHPRDASDLDNVLKIVVANNSNGSVSTVTGSGSGITTGSSESRVIEAGNLVISVQVLRNVTKNFARENEVGRGGFGVVYKGELEDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSLKLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEETQYLASWFWHIKSDKEKLMSAIDPALDIKEEMFDVVSIIAELAGHCSAREPNQRPDMSHAVNVLSPLVQKWKPLDDETEEYSGIDYSLPLNQMVKDWQETEGKDLSYVDLQDSKSSIPARPTGFAESFTSVDGR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00750 961 MobiDBLite consensus disorder prediction 942 961 - -
Gma10g00750 961 MobiDBLite consensus disorder prediction 451 503 - -
Gma10g00750 961 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Gma10g00750 961 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Gma10g00750 961 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Gma10g00750 961 Gene3D Transferase(Phosphotransferase) domain 1 693 912 - -
Gma10g00750 961 SMART LRR_typ_2 416 438 IPR003591 -
Gma10g00750 961 SMART LRR_typ_2 262 285 IPR003591 -
Gma10g00750 961 SMART LRR_typ_2 188 212 IPR003591 -
Gma10g00750 961 SMART LRR_typ_2 238 261 IPR003591 -
Gma10g00750 961 SMART LRR_typ_2 110 133 IPR003591 -
Gma10g00750 961 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 961 - -
Gma10g00750 961 Gene3D Ribonuclease Inhibitor 21 325 IPR032675 -
Gma10g00750 961 MobiDBLite consensus disorder prediction 456 503 - -
Gma10g00750 961 SUPERFAMILY L domain-like 20 304 - -
Gma10g00750 961 CDD STKc_IRAK 621 894 - -
Gma10g00750 961 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Gma10g00750 961 Gene3D Phosphorylase Kinase; domain 1 583 692 - -
Gma10g00750 961 PANTHER OSJNBA0070M12.3 PROTEIN 4 961 - -
Gma10g00750 961 SUPERFAMILY L domain-like 329 441 - -
Gma10g00750 961 Pfam Protein tyrosine and serine/threonine kinase 618 890 IPR001245 GO:0004672|GO:0006468
Gma10g00750 961 ProSiteProfiles Protein kinase domain profile. 615 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00750 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Gma10g00750 961 SMART serkin_6 615 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00750 961 SUPERFAMILY Protein kinase-like (PK-like) 594 900 IPR011009 -
Gma10g00750 961 Pfam Leucine rich repeat 90 145 IPR001611 GO:0005515
Gma10g00750 961 Pfam Leucine rich repeat 240 298 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00750 Gma-Chr10 9765032 9768816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00750 76 895 Receptor kinase-like Gene Family AT5G07180 29.516 1.50e-81 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gma10g00750 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00750 - - gmx:100781857 1774.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00750 10 9765032 9768816 Gma10g00750 10 9765032 9768816 ECH
Gma10g00750 10 9765032 9768816 Gma02g01864 02 43176773 43180817 GST
Gma03g01857 03 44510782 44514599 Gma10g00750 10 9765032 9768816 PCT
Gma10g00750 10 9765032 9768816 Gma03g01857 03 44510782 44514599 PCT