Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00723 ATGGAGGGAGAAGAAGTAGCAAGAGTCAAAGTAGAGTTGTTCGACGACAGCGAAAGCAATCGCAACGACGACGATGTTTTGAGCGAGAGCAAGGACTCGAGAGTGACAATGGAAGAAGTAACGATGAGGACGATGGCTCATGCAGTGAAAGAAGAGATGGATGACGACATTGTTAACTGGTCTTTGTCTTCATTAACGTCGCCGAAACCAATGGAAGGGTTGCACAAGGTGGGGCCCCCTCCATTCCTGAAGAAGACGTTTGAAATGGTGGAGGACCCTCACACCAACCCCATTGTGTCGTGGAGCCAAACTCGCAATAGTTTCATCGTTTGGGACTCACACGACTTCTCCAAAACCCTTTTCCCAAAGTACTTCAAGCACAACAATTTCTCAAGCTTCGTTCACCAGCTCAAAACCTATGTCAGTCAATTTTCCTACATCCTTGCCTTTTCTTCTTTGCCTCATTATTTTTCGTTGTCCTGA 483 0.4638 MEGEEVARVKVELFDDSESNRNDDDVLSESKDSRVTMEEVTMRTMAHAVKEEMDDDIVNWSLSSLTSPKPMEGLHKVGPPPFLKKTFEMVEDPHTNPIVSWSQTRNSFIVWDSHDFSKTLFPKYFKHNNFSSFVHQLKTYVSQFSYILAFSSLPHYFSLS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00723 160 Gene3D - 74 157 IPR036388 -
Gma10g00723 160 PRINTS Heat shock factor (HSF) domain signature 82 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma10g00723 160 PRINTS Heat shock factor (HSF) domain signature 120 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma10g00723 160 PRINTS Heat shock factor (HSF) domain signature 133 145 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma10g00723 160 Pfam HSF-type DNA-binding 82 140 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma10g00723 160 MobiDBLite consensus disorder prediction 1 32 - -
Gma10g00723 160 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 54 140 IPR027725 -
Gma10g00723 160 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 54 140 - -
Gma10g00723 160 SMART hsfneu3 78 158 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma10g00723 160 SUPERFAMILY "Winged helix" DNA-binding domain 78 141 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00723 Gma-Chr10 8846124 8846606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00723 68 140 HSF AT2G26150 71.233 4.67e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma10g00723 HSF_DNA-bind 2.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00723 K09419 - gmx:100778060 231.106