Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00716 ATGTCTAGTTCCAGAAAAAAACTGGTTCTGAACACTGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCCGAAGACCCAGGCTCCTACGGCACATATTCCACCCGAAGCAGAGGCCCAAGAAGCCCGCGGGCCAAGTCCACGGGCTTCATTGGGACGATACCACGACGAGCAGCACCACTACCAACGCCTCCACCGCCGCCACATTCTCGCCCTGTTACGCCGAGGCCTCGGCGCAGTTCAGCGACTTCGCCGAGACCGCGAAGGCGTTTGGGCGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCATACCTGGACTTCAGGCACTCTATGCTGCAGATGATACTGGAGAACGAGATATACTCCAAGGAAGATCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAATTCACCAGACCACCATGGGGTGATAGTGAGAGCCTTCACTGAGATCTGGAATGGAGTTTTCTCAGTGAGGAGGAGGTCTGGTTCTTCCACTGGGTTCCACCTTAACCGTAAGTCACGTGACTTCTAG 534 0.5599 MSSSRKKLVLNTVSVSLGCGSCRRPRLLRHIFHPKQRPKKPAGQVHGLHWDDTTTSSTTTNASTAATFSPCYAEASAQFSDFAETAKAFGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKEDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVRRRSGSSTGFHLNRKSRDF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00716 177 ProSiteProfiles OVATE domain profile. 95 154 IPR006458 -
Gma10g00716 177 Pfam Transcriptional repressor, ovate 99 155 IPR006458 -
Gma10g00716 177 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 93 153 IPR006458 -
Gma10g00716 177 MobiDBLite consensus disorder prediction 35 61 - -
Gma10g00716 177 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma10g00716 177 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 160 IPR038933 GO:0045892
Gma10g00716 177 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00716 Gma-Chr10 8688943 8689476 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma10g00716 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00716 - - gmx:100786450 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00716 10 8688943 8689476 Gma10g00716 10 8688943 8689476 ECH
Gma10g00716 10 8688943 8689476 Gma02g01892 02 43978773 43979677 GST