Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00709 ATGTCTGTGGCTTTTGATACTTGGAATGCTCCATCGCCCTTGGCTCTTTGGGAAAGAGTCTTGCTACACTCAATTGCGACGAGGTTTGGGTCAATAGCAGCCCAAGACAGGCAATTCCCATACGAGAAGACGGGCTTCTTATTCGTACGGTGCAAGGTGACAGGAACAGGCCCAATTTACGTGGGTCGTGCAATGGGCCAGTACTCCAGGATTGTCTATGCCTACACTTACTTTGACGGCATAGTTGCACATGGTGGTTGGGATGATATTGATTGGAACACTTCCAACAATAACAAGACTATGTTCTTTGGAGTGTACAAATGCTGGGGACCAGGAGCAGCGACTATACGTGGAGTCCCATTGGCCCAAGAGCTAGATTTCGAATCTGCCCATCTATTCCTTGTCAACAGTTTTGTCAATGGAAGACACTGGATTACACCCTCTGATGCTTTGTTAACTGATAATATTCCAATCAACCAAAGAAAAAAAAAACTCCATAGGAAATTGCACAGTTACAGTCTATCCAATACTATTGATGTCATTATCTCCTTTTTTTTCTGGGTTTAA 567 0.4392 MSVAFDTWNAPSPLALWERVLLHSIATRFGSIAAQDRQFPYEKTGFLFVRCKVTGTGPIYVGRAMGQYSRIVYAYTYFDGIVAHGGWDDIDWNTSNNNKTMFFGVYKCWGPGAATIRGVPLAQELDFESAHLFLVNSFVNGRHWITPSDALLTDNIPINQRKKKLHRKLHSYSLSNTIDVIISFFFWV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00709 188 PANTHER PECTINESTERASE 18 150 - -
Gma10g00709 188 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 150 - -
Gma10g00709 188 Pfam Pectinesterase 27 141 IPR000070 GO:0030599|GO:0042545
Gma10g00709 188 Gene3D - 12 156 IPR012334 -
Gma10g00709 188 SUPERFAMILY Pectin lyase-like 23 148 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00709 Gma-Chr10 8452072 8453110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00709 15 150 Carbohydrate Esterase AT5G47500 69.853 2.25e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00709 - - gmx:100796327 265.388