Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00700 ATGGGGCGTGTTCGCACAAAGACAGTGAAGAAGTCCTCGCGGCAAGTGATCGAGAGGTACTACTCTCGCATGACGCTGGACTTCCACACGAACAAGAAGGTTCTGGAAGAGGTGGCCATCATTCCCTCCAAGAGGCTCCGCAACAAGATCGCGGGATTCTCCACCCACCTCATGAAGCGGATCCAGAAGGGTCCCGTACGTGGAATCTCCCTCAAGCTGCAGGAGGAGGAGCGCGAGCGCCGCATGGACTTCGTCCCCGATGTCTCCGCCATCAGAACCGACCAGATCGAGGTCGACAAGGAGACGCTCGACATGCTCGCCGCCCTCGGAATGTCCGAGGTTCCCGGGGTTGTTCAGGTGGATCCTGTTGCTGTCCAGGCACCGCTCGGCTTCGGCCGCGGCGCCGGAAGGAGATAA 417 0.6019 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDQIEVDKETLDMLAALGMSEVPGVVQVDPVAVQAPLGFGRGAGRR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00700 138 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 PANTHER 40S RIBOSOMAL PROTEIN S17 1 136 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Gma10g00700 138 PANTHER 40S RIBOSOMAL PROTEIN S17 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00700 Gma-Chr10 7972625 7973862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00700 1 137 Cytoplasmic Ribosomal Protein Gene Family AT3G10610 82.482 9.97e-81 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00700 K02962 - gmx:100785402 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00700 10 7972625 7973862 Gma10g00700 10 7972625 7973862 ECH