Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00698 ATGTCCATAAACCACTACTCCATGGACCTTCCCGAACCGACACTCTGGTGGCCACACCCACACCACCAACAACAACAACTAACCTTAATGGATCCTGACCCTCTCCGTCTCAACCTCAATAGCGACGATGGCAATGGCAATGACAACGACAACGACGAAAATCAAACAACCACAACAGGAGGAGAACAAGAAATATTAGACGATAAAGAACCGATGTTCGAGAAGCCCTTAACCCCGAGCGACGTGGGGAAGCTGAACCGTCTCGTAATCCCGAAGCAGCACGCGGAGAAGTACTTCCCACTGAGTGGTGACTCGGGCGGGAGCGAGTGCAAGGGGCTGTTACTGAGTTTCGAGGACGAGTCGGGGAAGTGTTGGCGCTTCCGCTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTCACCAAAGGGTGGAGCCGCTACGTCAAGGACAAGCGCCTTGACGCGGGCGACGTCGTTTTGTTCGAGCGTCACCGCGTCGACGCGCAGCGCCTCTTCATCGGGTGGAGGCGCAGGCGGCAGAGCGATGCCGCCTTGCCGCCTGCGCACGTTAGCAGTAGGAAGAGTGGTGGTGGTGATGGGAATAGTAATAAGAATGAGGGGTGGACCAGAGGGTTCTATTCTGCGCATCATCCTTATCCTACGCATCATCTTCATCATCATCAGCCCTCGCCATACCAACAACAACATGACTGTCTTCATGCAGGTAGAGGGTCCCAAGGTCAGAACCAAAGGATGAGACCAGTGGGAAACAACAGTTCTAGCTCTAGTTCGAGTTCAAGGGTACTTAGGCTGTTCGGGGTCGACATGGAATGCCAACCCGAACATGATGATTCTGGTCCCTCCACACCCCAATGCTCCTACAATAGTAACAACATGTTGCCATCAACACAGGGCACAGATCATTCCCATCACAATTTCTACCAACAGCAACCTTCTAATTCCAATCCTTCCCCTCATCACATGATGGTACATCACCAACCATACTACTACTAG 1014 0.5276 MSINHYSMDLPEPTLWWPHPHHQQQQLTLMDPDPLRLNLNSDDGNGNDNDNDENQTTTTGGEQEILDDKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSSRKSGGGDGNSNKNEGWTRGFYSAHHPYPTHHLHHHQPSPYQQQHDCLHAGRGSQGQNQRMRPVGNNSSSSSSSSRVLRLFGVDMECQPEHDDSGPSTPQCSYNSNNMLPSTQGTDHSHHNFYQQQPSNSNPSPHHMMVHHQPYYY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00698 337 MobiDBLite consensus disorder prediction 227 269 - -
Gma10g00698 337 SMART B3_2 73 179 IPR003340 GO:0003677
Gma10g00698 337 CDD B3_DNA 71 169 IPR003340 GO:0003677
Gma10g00698 337 SUPERFAMILY DNA-binding pseudobarrel domain 68 180 IPR015300 -
Gma10g00698 337 Pfam B3 DNA binding domain 73 178 IPR003340 GO:0003677
Gma10g00698 337 MobiDBLite consensus disorder prediction 195 209 - -
Gma10g00698 337 ProSiteProfiles B3 DNA-binding domain profile. 73 179 IPR003340 GO:0003677
Gma10g00698 337 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 29 305 IPR044800 GO:0003700
Gma10g00698 337 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 29 305 - -
Gma10g00698 337 MobiDBLite consensus disorder prediction 33 78 - -
Gma10g00698 337 MobiDBLite consensus disorder prediction 183 327 - -
Gma10g00698 337 MobiDBLite consensus disorder prediction 40 62 - -
Gma10g00698 337 MobiDBLite consensus disorder prediction 284 327 - -
Gma10g00698 337 Gene3D - 63 188 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00698 Gma-Chr10 7933076 7936031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00698 67 293 RAV Transcription Factor Family AT5G06250 50.427 2.13e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma10g00698 B3 6.4e-30 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00698 - - gmx:100795470 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00698 10 7933076 7936031 Gma10g00698 10 7933076 7936031 ECH
Gma10g00698 10 7933076 7936031 Gma02g01904 02 44138028 44140697 GST
Gma19g01869 19 47884486 47886143 Gma10g00698 10 7933076 7936031 PCT
Gma03g01828 03 44290675 44292336 Gma10g00698 10 7933076 7936031 PCT