Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00681 ATGTCACTATCATCCATTTTTCTAAACCcACCCCCACCCTCACCCTCTTTCCTCCACCTCCACTCCCCCAACCGCCACAACCACCACCACCCGCCAAAACCCCTCCAAATCCGCGCCAAAACCAACCCCACCCTCCAATTCCTCAAACCCTACCTCCTCTCCCAACACAAGCCCATCCTCTGCGGCTGGCTCTGCAGCGCCGTCTCCGTCTACTCCCTCTCCGCTCTCCTCTCCAAGCTCCCCAAACTCCCCATCCTTAGCGCCACCGCCGCCGACGCCGCCCCCATCGCCGCGCTCCTCCTCGTCGCGCGCCTCGCCGCCGGCTACGCGCAGCGCGCGCTCCTCTGGGAGGCCGCGCTCGGCGCCGTCTACGACCTCCGCCTTCACGTCTTCGACCGCGTCCTCCACCGCGAGCTCGCGTACTTCGAGGGCGTCTCCGCCGGTGACTTAGCGTACCGAATCACCGCCGAAGCCTCCGACCTCGCCGTTACCTTGTACACTCTTCTCAACACCATAGTACCTAGTACTCTGCAGTTGTCGGCAATGATGATGCAGATGTTAGTCATAAGTCCTACACTTTCTTTGATTTCAGCCATGATTGTTCCTTGCATGGTGCTAGTTGTTACCTTTCTTGGTCAAGAACTTCGCAAGATATCCAAAGAGGCACATGTTAGTATTGCTGCTCTCTCGGCCTATCTAAATgAGGTGCTTCCTGCAATTCTCTTTGTGAAAGCAAACAATGCACAGTCATGTGAGAATACCAGGTTTAAGAGATTGGCTCTGATGGACTATAATGCAAGGCTGAAGAAAAAAAAGATGAAAGCATTGATTCCTCAGGTTATACAAGCTATTTATTTTGGAGTCCTTTCCATACTTTGCGCTGGTTCGCTGATGATTTCAAGAGGTTCATTGGATCGCTATAGCTTGGTTTCATTCGTGACTTCATTGCTTTTCTTGATTCAGCCAATCCAGGATGTAGGGAAAGCTTATAATGAATGGAGGCAGGGAGAACCAGCTGCTGAACGCTTGCTTGCCATGACCAGGTTCAAAAATAAGGTGGTTGAGAAACCAGATGCTGCTGATTTGGACCGTGTTACAGGGGACCTGAAATTCTGTGATGTCTCCTTTGGGTATAACGATGACATGGCACTTGTTTTAAATGCATTAAATCTTCACATTAAATCTGGAGAGATAGTTGCTATTGTGGGTCCTTCTGGTGGAGGGAAAACAACACTTGTAAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGTTGTATACTGATTGATAACCATAACATCCAAAACATTCGGTTGGCAAGTTTGAGAAGACATGTTAGCGTTGTTTCTCAAGATATAGGTGAAGCATGCAGCTCAAACTGCTCATGCAGACGAGTTTATTAA 1404 0.4964 MSLSSIFLNPPPPSPSFLHLHSPNRHNHHHPPKPLQIRAKTNPTLQFLKPYLLSQHKPILCGWLCSAVSVYSLSALLSKLPKLPILSATAADAAPIAALLLVARLAAGYAQRALLWEAALGAVYDLRLHVFDRVLHRELAYFEGVSAGDLAYRITAEASDLAVTLYTLLNTIVPSTLQLSAMMMQMLVISPTLSLISAMIVPCMVLVVTFLGQELRKISKEAHVSIAALSAYLNEVLPAILFVKANNAQSCENTRFKRLALMDYNARLKKKKMKALIPQVIQAIYFGVLSILCAGSLMISRGSLDRYSLVSFVTSLLFLIQPIQDVGKAYNEWRQGEPAAERLLAMTRFKNKVVEKPDAADLDRVTGDLKFCDVSFGYNDDMALVLNALNLHIKSGEIVAIVGPSGGGKTTLVKLLLRLYDPISGCILIDNHNIQNIRLASLRRHVSVVSQDIGEACSSNCSCRRVY 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00681 467 Gene3D - 349 460 IPR027417 -
Gma10g00681 467 Gene3D ABC transporter type 1, transmembrane domain 46 348 IPR036640 GO:0005524|GO:0016021
Gma10g00681 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 453 IPR027417 -
Gma10g00681 467 Pfam ABC transporter 386 452 IPR003439 GO:0005524
Gma10g00681 467 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 37 453 IPR039421 -
Gma10g00681 467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 96 335 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma10g00681 467 SUPERFAMILY ABC transporter transmembrane region 48 347 IPR036640 GO:0005524|GO:0016021
Gma10g00681 467 PANTHER ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC 37 453 - -
Gma10g00681 467 CDD ABC_6TM_exporters 108 343 - -
Gma10g00681 467 Pfam ABC transporter transmembrane region 97 322 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00681 Gma-Chr10 7649079 7654726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00681 361 452 Calmodulin-binding Proteins AT2G36910 40.426 1.30e-14 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00681 10 7649079 7654726 Gma10g00681 10 7649079 7654726 ECH