Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00651 ATGATCCTCACAGGAAAAGGTCCTGCTCTTGGATCTCTATGGGTTGCAAACCTCCCCCTCAAGGTTGGATTAAAGCTAATGTTGATGTATCAGTTGGTGCTAGAGGACACTTTGCTGCTTGTGGAGGTGTTTTCAGGGATTCTCAAGATTCTTCTCACCATCGTTCTTTATTATTATCATCCCCTCCTCTTCCTTCCTTCTCCTCTCATTCCATACCTCAACAAAACAAGGTTCAGAGACTTTTCCGATTCCTGGAAGAAGAGAAGAGAAAACCTAAATCACAGATCCATGGCGGAAGAACACCGATGTGAACCTCCCGAAGGTCACCGACTCTGCGTCAACAACTGCGGCTTCTTCGGTAGCACCGCCACGATGAACCTCTGCTCCAAATGCTACAGCGCGATCCGTTTGAAGGAGCAAGAAGAAGCGTCGACGAAATCCACAATCGAAACCGCGCTCTCTTCTGCCTCCTCGGCGAAACCGTCGTCGTCCACGTCACCTCCGCCGTCGGCGGTCGATGTGCTCATGGAATCTCCACCGCCGTCTGCGGCGGAGGTTGAGGTTGCTGTCACGGTCACGGTCGCGGTGGCGTCGAGTTCTATTTCCATAAACTCAGGTTCGGTTGCGCAACCGAACCGGTGTGCCACGTGTCGGAAGCGCGTGGGGCTGACCGGGTTCAAGTGCAGGTGCGGAGTGACGTTCTGCGGGGCCCACAGGTACCCGGAGGAGCACGCGTGCGGGTTCGATTTCAAGACAGTGGGAAGAGAGGAGATTGCACGTGCCAACCCCGTGATCAAAGCGGAGAAGCTGCGGAGGATTTGA 822 0.5414 MILTGKGPALGSLWVANLPLKVGLKLMLMYQLVLEDTLLLVEVFSGILKILLTIVLYYYHPLLFLPSPLIPYLNKTRFRDFSDSWKKRRENLNHRSMAEEHRCEPPEGHRLCVNNCGFFGSTATMNLCSKCYSAIRLKEQEEASTKSTIETALSSASSAKPSSSTSPPPSAVDVLMESPPPSAAEVEVAVTVTVAVASSSISINSGSVAQPNRCATCRKRVGLTGFKCRCGVTFCGAHRYPEEHACGFDFKTVGREEIARANPVIKAEKLRRI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00651 273 MobiDBLite consensus disorder prediction 146 173 - -
Gma10g00651 273 ProSiteProfiles Zinc finger AN1-type profile. 208 254 IPR000058 GO:0008270
Gma10g00651 273 SUPERFAMILY AN1-like Zinc finger 209 268 IPR035896 -
Gma10g00651 273 SMART A20_3 109 133 IPR002653 GO:0003677|GO:0008270
Gma10g00651 273 MobiDBLite consensus disorder prediction 146 171 - -
Gma10g00651 273 Gene3D - 95 168 - -
Gma10g00651 273 PANTHER AN1-TYPE ZINC FINGER PROTEIN 97 273 - -
Gma10g00651 273 ProSiteProfiles Zinc finger A20-type profile. 106 140 IPR002653 GO:0003677|GO:0008270
Gma10g00651 273 Gene3D - 194 269 IPR035896 -
Gma10g00651 273 PANTHER BNAC06G14100D PROTEIN 97 273 - -
Gma10g00651 273 Pfam AN1-like Zinc finger 214 250 IPR000058 GO:0008270
Gma10g00651 273 SMART AN1_Zf_4 214 251 IPR000058 GO:0008270
Gma10g00651 273 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 111 155 - -
Gma10g00651 273 Pfam A20-like zinc finger 110 132 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00651 Gma-Chr10 7228373 7236578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00651 97 273 C2H2 Transcription Factor Family AT3G52800 52.809 3.03e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00651 - - gmx:100813749 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00651 10 7228373 7236578 Gma10g00651 10 7228373 7236578 ECH
Gma19g01827 19 47553561 47555383 Gma10g00651 10 7228373 7236578 PCT
Gma03g01784 03 43960084 43962295 Gma10g00651 10 7228373 7236578 PCT