Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00624 ATGAAGGTGGTCGCTGCGTATCTGCTCGCCGTCCTCGGTGGCAACAACACCCCCTCCACCGATGACATCAAGGAAATCCTCGGCTCCGTTGGAATAGAGGCAGATGAAGATAGGATTGAATCGTTCTTGTCTGAAGTTAAGGGTAAGGATATAGTTGAGCTAATTGCTGCCGGTAAGGAAAAGCTGGCCTCGGTGCCTTCTGGTGGCGGTGGTGCCGTTGCCGTCGCCGCTGCTCCTGGTGGAGGTGGCGGTGGTGCTGCTCCGGCTGCTGAGGTAAAGAAAGAGGAAAAGGTGGAGGAGAAAGAGGAATCTGATGATGATATGGGTTTCAGTCTCTTCGATTAA 345 0.5333 MKVVAAYLLAVLGGNNTPSTDDIKEILGSVGIEADEDRIESFLSEVKGKDIVELIAAGKEKLASVPSGGGGAVAVAAAPGGGGGGAAPAAEVKKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00624 114 Gene3D - 1 59 IPR038716 -
Gma10g00624 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma10g00624 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
Gma10g00624 114 MobiDBLite consensus disorder prediction 76 114 - -
Gma10g00624 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma10g00624 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma10g00624 114 Pfam 60s Acidic ribosomal protein 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00624 Gma-Chr10 6783191 6784733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00624 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 65.789 1.33e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00624 K02943 - gmx:100500331 141.739