Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00622 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTCGAAGCAAGGGAAGACCTAAATACAGAGAAAGATACGGGGATATATCAGTCCAATTCTGGATATAGCCTGGATGAGAAATTTCAGAAGCATCCTGTGCAGAAACTGGGATATAAGGGTAATCTAGATGATGATATTAATAAGCTGTTTGAGTCAATTACTCTTAAATCTTCCTCAAGGGATTTGGGCTTTATACATGGTACAAGCCCTAAGATGAAAAGTGCATTGAAAAAACCAATTGCAGTGGGTGCTTCTCGGTCCCCACGAGTTGGACCTTCTGAGCCTGTGACTTTGAAGCAGGCACTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTTCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCACGAATATCTGAGGTTGGGAAGATACATACATTGTACAATTCAGTTGTAGTTGAAGGTAGACGATCTGAGCCTTCTAATGTTGAGAGTAAAGGTAGTACAAGTGAAATATCTCTAGTGCCAGAAGAGAGCAACTCACTTTCTTTGGATAATGCTTACCAGTCTCGTTCAACTGTTAAAAGCACTTCGCTGAGCCCAAATGTTCAATCTTCCAAAATTGCTGTTGCAATTGCAATTACACAAAATGATACTGGGGCTTCATTGATGCCAAGTGACCTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACCGTCATCAGAGCCTGCTCAAATAGAGAAACAAACATCTGAATCTTCTTCATCTAGTTGTAACACCAATGGAAGTAAATTAGAGTTGCCCGAAAATGCTTCTTCCCCTAAAAAGATAGGAAATAAAGCCTCTGCATCAAAGAATGGGCGGAAAGGTAGGTTACAAACAGTCTCTTCCTCATCTACTTCGGTAAATGGCAATAGAGTGTGCAAACTGTCACGCAATGCCCCTCGTACAGTCAAATCAATTATCAAGAACAAAAATTTTGGAAAGAAAAAAGTAAAGCAGGATTCAGTTTCTGCTTTATTTGATCCTACATGCAGTGAAGTAAATGACAAGTCAGTTTCTGGTACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATTGAAAATAACAAAGGTATTACATCATTGGACTCTATCAGTCCTGGAGAGGGAATAAACTCTGTTAATAACTCTGGCGCTGCATCAGCTGGCTGTAATAGCAGCAGAGAAGTTACAAAAGTGAAAAAGAACACCGTATTGAAAGAGCAACTTGAATTTTCTCAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGAAAGCCATACGCCATGCTCAAATTCAGAATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAGTTGTTTGTTTGCTATTAAGGTGATGGACAATGAGTTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAACGAGAAATATTGAGGATGCTGGATCATCCTTTTCTTCCAACACTGTATGCTCAGTTTACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTGGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCGCTAAGGTGTGATGTTAGCCCAACACTTCTGAAGTCATCTTATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCGAGTTGCATTGAGCCATTCTGTATTGAACCAGCCTGTCAAGTTCCGTGCTTCAGCCCAAGACTCCTACCTCCTGCCGCAAAAGCAAGGAAATTAAAAAATGACCTTGGTGCTCAGCTCAGATCATTGCCACAGCTCGTGGCTGAGCCCACAGATGCAAGATCAAATTCATTTGTCGGTACTCATGAATACTTGGCGCCTGAGATCATCAAAGGAGAAGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACACCCCATTTGTTAGTATCCAAGCGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATAAAACAGCACCCCTTCTTCGAAGGCCTTAATTGGGCGTTAATACGTTGCGCTATCCCACCAGAACTGCCAGACTTGTGTGAATTTGGAGTTTCAGAGATGACCCCACAGTCCCAGGGAAAGGGTGTTAAGTATGTAGAGTGCAATGCAGCAGGAGAGCTAGTTGAATTTGAGTTGTTTTGA 2592 0.4198 MGSFSGTCEIVEAREDLNTEKDTGIYQSNSGYSLDEKFQKHPVQKLGYKGNLDDDINKLFESITLKSSSRDLGFIHGTSPKMKSALKKPIAVGASRSPRVGPSEPVTLKQALRDLCISKASEMASMKRLSKSTASPRISEVGKIHTLYNSVVVEGRRSEPSNVESKGSTSEISLVPEESNSLSLDNAYQSRSTVKSTSLSPNVQSSKIAVAIAITQNDTGASLMPSDLASSSSKVGVLSPSSEPAQIEKQTSESSSSSCNTNGSKLELPENASSPKKIGNKASASKNGRKGRLQTVSSSSTSVNGNRVCKLSRNAPRTVKSIIKNKNFGKKKVKQDSVSALFDPTCSEVNDKSVSGTTQLVCERCWCAIENNKGITSLDSISPGEGINSVNNSGAASAGCNSSREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDVRWKAIRHAQIQNGVLGLRHFNLLKKLGCGDIGTVYLAELIGKSCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSYVDPAKISGPCAQSSCIEPFCIEPACQVPCFSPRLLPPAAKARKLKNDLGAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDTPFVSIQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFGVSEMTPQSQGKGVKYVECNAAGELVEFELF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00622 863 Pfam Protein kinase domain 480 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00622 863 Pfam Protein kinase domain 707 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00622 863 MobiDBLite consensus disorder prediction 225 306 - -
Gma10g00622 863 MobiDBLite consensus disorder prediction 156 186 - -
Gma10g00622 863 MobiDBLite consensus disorder prediction 420 452 - -
Gma10g00622 863 SMART serkin_6 479 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00622 863 MobiDBLite consensus disorder prediction 225 269 - -
Gma10g00622 863 MobiDBLite consensus disorder prediction 420 454 - -
Gma10g00622 863 SUPERFAMILY Protein kinase-like (PK-like) 454 827 IPR011009 -
Gma10g00622 863 MobiDBLite consensus disorder prediction 276 306 - -
Gma10g00622 863 ProSiteProfiles Protein kinase domain profile. 479 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00622 863 CDD STKc_phototropin_like 477 829 - -
Gma10g00622 863 Gene3D Phosphorylase Kinase; domain 1 477 558 - -
Gma10g00622 863 PANTHER FLIPPASE KINASE 1-RELATED 1 863 - -
Gma10g00622 863 MobiDBLite consensus disorder prediction 162 186 - -
Gma10g00622 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Gma10g00622 863 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 863 - -
Gma10g00622 863 Gene3D Transferase(Phosphotransferase) domain 1 704 827 - -
Gma10g00622 863 Gene3D Transferase(Phosphotransferase) domain 1 559 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00622 Gma-Chr10 6733738 6736891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00622 1 863 AGC Kinase Gene Family AT2G36350 51.867 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma10g00622 Pkinase 7.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00622 - K08286 gmx:100815359 1621.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00622 10 6733738 6736891 Gma13g01313 13 27651101 27655586 GST
Gma19g01649 19 45881081 45882428 Gma10g00622 10 6733738 6736891 PCT
Gma03g01603 03 42243792 42245150 Gma10g00622 10 6733738 6736891 PCT
Gma19g01820 19 47494460 47497884 Gma10g00622 10 6733738 6736891 PCT
Gma03g01774 03 43875555 43878955 Gma10g00622 10 6733738 6736891 PCT
Gma10g00622 10 6733738 6736891 Gma19g01820 19 47494460 47497884 PCT
Gma10g00622 10 6733738 6736891 Gma03g01774 03 43875555 43878955 PCT