Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00617 ATGGCTTCCCTCAATCACCTTCGAATTTCACTCTCAACACAACTTTTCATACACATAGACACCATGTATTCCGGCAATGCAAGCAGCAGCAGCAGCAGAGGCTCTTCCGGATCCGGAAAGTACCGCGGGGTGAGGCGTAGAACCAGCGGAAAATGGGTGTCGGAGATTCGCGAGCCGAAGAAGCCTAACAGAATTTGGTTAGGCACGTTCCCCACGCCGGAAATGGCCGCCGTGGCGTATGACGTTGCCGCTTTGGCTCTCAAGGGTAAGGATGCTGGGCTCAACTTTCCGGACTCCGCTTCTTCGCTTCCTGTCCCGGCTTCGCTCTCTGCGCGCGACATTCAGGTGGCGGCTGCAGCGGCCGCGGCTGCTGCCGGAGCAGCGAATGATGCTATGAGGACACAAACAGCAAATAATAACTTTTCAGAGGCACAAGAGAATCAAACTGGGATGAGTAACCAGTTTGTGGATGAGGATTTGATCTTTGACATGCCCAATGTTCTGGTCAACATGGCTCAGGGAATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTTTGGAACCGAATAGCCCAGAAAACACCGAACAAGAGACAAACCTGTGGAATTTCCCTTAA 615 0.5236 MASLNHLRISLSTQLFIHIDTMYSGNASSSSSRGSSGSGKYRGVRRRTSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGKDAGLNFPDSASSLPVPASLSARDIQVAAAAAAAAAGAANDAMRTQTANNNFSEAQENQTGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENTEQETNLWNFP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00617 204 MobiDBLite consensus disorder prediction 189 204 - -
Gma10g00617 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 26 204 - -
Gma10g00617 204 MobiDBLite consensus disorder prediction 25 49 - -
Gma10g00617 204 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Gma10g00617 204 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Gma10g00617 204 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Gma10g00617 204 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Gma10g00617 204 MobiDBLite consensus disorder prediction 184 204 - -
Gma10g00617 204 CDD AP2 40 99 IPR001471 GO:0003700|GO:0006355
Gma10g00617 204 SUPERFAMILY DNA-binding domain 40 99 IPR016177 GO:0003677
Gma10g00617 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 26 204 - -
Gma10g00617 204 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Gma10g00617 204 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00617 Gma-Chr10 6624547 6625417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00617 41 204 AP2-EREBP Transcription Factor Family AT2G36450 60.694 1.84e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma10g00617 AP2 4.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00617 - - gmx:100811614 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00617 10 6624547 6625417 Gma10g00617 10 6624547 6625417 ECH
Gma10g00617 10 6624547 6625417 Gma13g01306 13 27565401 27566334 GST
Gma19g01813 19 47384221 47384787 Gma10g00617 10 6624547 6625417 PCT
Gma03g01765 03 43740703 43741376 Gma10g00617 10 6624547 6625417 PCT