Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00611 ATGTTTCATTATCCTTGCACTCTTTCATTCTCTCTCGCGCCCTCTCTCCTTCTGTCCCACGTTGTCTCCCTCAAGCTCCAGGAGGAGGAGCGCGAGCACCACATCAACTTCATCCCTGACATCTCCACCATCAACACCGACCACATCAAAGTCAACAAGGAGACCCTCAACATGCTTCATTCCCTCGGAATCAATGACATCCCCGGCATCACACAGGTTGACATTGTTTCTATTCAACAGAGCTTCCCCTTCACCAGGAGGTATTGA 267 0.5019 MFHYPCTLSFSLAPSLLLSHVVSLKLQEEEREHHINFIPDISTINTDHIKVNKETLNMLHSLGINDIPGITQVDIVSIQQSFPFTRRY 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00611 88 PANTHER 40S RIBOSOMAL PROTEIN S17 22 86 - -
Gma10g00611 88 PANTHER 40S RIBOSOMAL PROTEIN S17 22 86 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma10g00611 88 Pfam Ribosomal S17 20 73 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00611 Gma-Chr10 6504435 6504701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00611 22 74 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 64.151 1.62e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00611 K02962 - gmx:100500063 113.62