Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00608 ATGGAAATGCCTGCCAGAAGATCCAACTATTCGCTCCTCAGCCAAATTCCCGACGACCAGTTCTCCTCCGCCGCCGCTCCCTCATCCTCCGGCGACGGCAAGGCCGGCCGTGCCGGAAAGTCCGACCGTGCCGCCTTCGAATGGGACCTCGTCGCTGATCACCGGGCCGCCAACCGGATCGGAAACGTCTACTCCTCGATAGGCCTGCAGCGCCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTCTCCGGCGGCGGCGACTTCTACGCTCCGACGATCTCCACGGCGGCGGCCAGCGACGTCGACGCCTTCGGCTACCTCCACGACGAGCGAAGCAAGTTCTCGGAGGCGGCGCCGGCGAGGATCGCCGGCTCCTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGCTACCAGCTGCAGCTCGCGCTCGCTCTGCGGCTCTCGTCCGACGCCACGTGCGCCGATGATCCCAATTTCCTCGATCCGGTGCCGGACGACGGCGCGCTGCGGCTCTTGTGGTCGGCCGAGGCAGTTTCGCATAGGTTTTGGGTGAATGGTTGCCTATCATACTCTGACAAAATTCCAGATGGCTTTTACCTAATTCACGGGATGGATTCCTTTGTCTGGACCATGTGCACTGATCTGCATGAAAATGGACGAATTCCATCAGTTGATATGCTGAAGTCTGTGAATCCCTGTGTCGTTCCTTCACTCGAAGTAGTTATGGTGGATCGATGCAGTGACCCCAGCTTAAGAGATCTGCAAAATAGTGTTCATAACATTTCTTTCACTAGCATAACAACAACAGATGTTGTAGATAAACTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATCACTTTTTTTCCATCTGGAGGAATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTATTCCCATAGGTAGTCTATCTGTTGGCCTCTGCCGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTACCATGTCGAATTGCTAAGGGCTGTAAATATTGCAAAAGGGATGATGCTTCATCTTGTCTTGTTCGATTTGGGATTGAGAGGGAGTATCTTGTTGATTTAATTGGAAAGCCAGGAAACTTATCCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCTGAAACTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGACTGTGTGTCTCTTGAGCTTGTCTTTGACAACAATTCTGCAGAACAGTTTGATGGGAAGTGCAAAGACAGGAATAACCCTAGGCCAATTTTGACTGACAGCAATAGAAGTTCTCACCTTCCTCTGCATCCTCAAGATTCTCATCCAAGCTCACGGGAACAAGGTTCCGAAACATATCAATCATGTAACCCTCCTCAGAACATTGTAGACTCGACTGTGGGAAAGTATCCACCACCAATAAAGCATAAGCGTCCTGCTGGTATACCAACCCCATTAGCACTTACAAATACTAATGATGACATGATTGAGGGCAAGAGGTTTGCTGAAGGAAGTCAACTGATTCCTAGCAAACATGCTCGAGAGCTTAACCTTGACATGGAGGATTTGGACATACCATGGTGCGATCTTGTTTTAAGAGAGAAAATAGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGACGTTGCTGTGAAAATTTTGATGGAACAGGATTTTCTTGCTGAGCGCTTCAAGGAATTCCTAAGGGAGGTTGCAATAATGAAACGTTTACGGCATCCAAACATTGTTTTGTTTATGGGGGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACAGAATATTTATCAAGGTTGGGTAGCTTATATAGGCTGTTGCATAGGTCTGGTGCCAAAGAAGTATTGGATGAGCGGCGTAGGCTTGGTATGGCTTATGACGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCACGTCTGAAGGCCAATACATTTCTCTCATCCAAATCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAGGTTCTTCGTGATGAGCCATCGAATGAGAAGTCTGATGTTTACAGCTTTGGTGTAATCTTATGGGAGCTTGCAACATTGCAACAGCCATGGATTAATTTAAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGGAAAAGGCTAGAGATCCCACATGATGTGAATCCTCAAGTAGCTGCACTAATTGATGCTTGCTGGGCGAATGAGCCTTGGAAACGTCCTTCTTTTGCCAGTATTATGGATTCTTTGAGGCCATTGCTCAAACCCCCTACACCTCAACCTGATTACACTGCTTTAGTTGTCCCTAGAGTCAATTGTATATTTCTTTAA 2529 0.4832 MEMPARRSNYSLLSQIPDDQFSSAAAPSSSGDGKAGRAGKSDRAAFEWDLVADHRAANRIGNVYSSIGLQRQSSGSSYGESSLSGGGDFYAPTISTAAASDVDAFGYLHDERSKFSEAAPARIAGSSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDDGALRLLWSAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSFVWTMCTDLHENGRIPSVDMLKSVNPCVVPSLEVVMVDRCSDPSLRDLQNSVHNISFTSITTTDVVDKLSKLVCNRMGGSASVGEDHFFSIWRNCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGIEREYLVDLIGKPGNLSEPDSLLNGPSSISFSSPLRFPRLKPAETTIDFRSLAKQYFSDCVSLELVFDNNSAEQFDGKCKDRNNPRPILTDSNRSSHLPLHPQDSHPSSREQGSETYQSCNPPQNIVDSTVGKYPPPIKHKRPAGIPTPLALTNTNDDMIEGKRFAEGSQLIPSKHARELNLDMEDLDIPWCDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFLAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRLGSLYRLLHRSGAKEVLDERRRLGMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWINLNPAQVVAAVGFKGKRLEIPHDVNPQVAALIDACWANEPWKRPSFASIMDSLRPLLKPPTPQPDYTALVVPRVNCIFL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00608 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Gma10g00608 842 Pfam Ethylene-responsive protein kinase Le-CTR1 178 383 - -
Gma10g00608 842 Gene3D Phosphorylase Kinase; domain 1 554 639 - -
Gma10g00608 842 CDD STKc_MAP3K-like 567 816 - -
Gma10g00608 842 SMART serkin_6 561 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00608 842 SUPERFAMILY Protein kinase-like (PK-like) 544 815 IPR011009 -
Gma10g00608 842 Pfam Protein tyrosine and serine/threonine kinase 562 816 IPR001245 GO:0004672|GO:0006468
Gma10g00608 842 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 120 825 - -
Gma10g00608 842 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672|GO:0006468
Gma10g00608 842 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Gma10g00608 842 PRINTS Tyrosine kinase catalytic domain signature 677 695 IPR001245 GO:0004672|GO:0006468
Gma10g00608 842 PRINTS Tyrosine kinase catalytic domain signature 724 734 IPR001245 GO:0004672|GO:0006468
Gma10g00608 842 ProSiteProfiles Protein kinase domain profile. 561 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00608 842 MobiDBLite consensus disorder prediction 455 495 - -
Gma10g00608 842 Gene3D Transferase(Phosphotransferase) domain 1 641 826 - -
Gma10g00608 842 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 120 825 - -
Gma10g00608 842 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524
Gma10g00608 842 MobiDBLite consensus disorder prediction 441 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00608 Gma-Chr10 6472779 6482131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00608 1 832 MAP Kinase Kinase Kinase AT5G03730 64.014 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma10g00608 PK_Tyr_Ser-Thr 9.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00608 K14510 - gmx:100775768 1644.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00608 10 6472779 6482131 Gma10g00608 10 6472779 6482131 ECH
Gma10g00608 10 6472779 6482131 Gma13g01299 13 27464316 27473935 GST
Gma03g01759 03 43662426 43675140 Gma10g00608 10 6472779 6482131 PCT
Gma10g00608 10 6472779 6482131 Gma03g01759 03 43662426 43675140 PCT