Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00599 ATGATGATGAAGCATTACCATGTCTTGTTCATGTTTTTATTTTTCTTACCGATTTTCACGTTAAGTCTCCACCACAATGACACTCATGCACTTACACTTTTTCGTCGTCAAAGTGACCTACATGGCTACCTTCTTTCAAATTGGACAGGCGGCGATGCTTGTATCGCCGCCTGGCGCGGCGTTCTTTGTTCTCCGAATGGCCGCGTCACCGCCCTCTCCCTCCCTTCCCTCAACCTCCGTGGAGCCCTAGACCCTCTCACTCCCCTCACCCACCTCCGCCTCCTCAACCTCCACGACAATCGCTTAAACGACACCATTTCGCTGTTATTCTCCAATTGCACCAACCTCCAACTCCTCTACCTCAGCAGCAACGACTTCTCTGGTGAGATCCCGCCGGAGATATCCTCCCTAAAATCCCTCCTCCGCCTTGACCTCTCCGACAACAACCTTCGCGGCAAGGTTGATGTGATATCAAACTTAACACAACTCATAACACTAAAACTCCAGAACAACCTTCTCTCTGGCGAAATCCCCGACCTTTCATCCTCCATGAAGAACCTCAAAGAACTCAACATGACAAACAACGAGTTCTACGGTCACTTACCATCCCCCATGCTGAAGAAATTCAGTTCCACGACGTTCTCTGGTAACGAGGGGTTGTGCGGTGCAACACCATTACCAGGTTGCTCTTTCACCACAACCCCTCCTAAGGATAATGGTAATAATAACAACAATGAAAAGGAACCGTCGTCTCAGACAACGGTTCCTTCAAACCCTAGCTCCTTCCCTGAGACAAGCGTGATAGCTCGTCCAGGGAAAGAGCAACGACACAGGGGTTTGAGTCCTGGCGCCATCGTGGCCATGGTGGTCGCGAACTGCGTGGCACTGCTCGTGGTGGCGTCGTTTGTGGTGGCGCATTGCTGTGCTAGAGGGAGGGGTTCGAGCTTGGTGGGGAGTAGAGAGAGCTATGGGAAGAGGAAGAGTGGGAGCAGCTACAATGGGAGTGAGAAGAAGGTGTATGGTGGTGGTGAGAGTGATGGAACCAGTGGAACTAATAGGAGTAGGCTTGTGTTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATTTGCTTCGAGCTTCGGCGGAGATGCTTGGGAAGGGGAGTTTGGGGACAGTTTATAGGGTGGTGCTTAATGATGGGTGCATTGTGGCAGTGAAGAGGCTCAAGGATGCGAACCCTTGTGCAAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAGCATTCTAATGTTGTGAGACTCAAGGCTTATTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGATGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCGGGAAGAATTCCATTGGATTGGACTACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGTCTAGCCAAGATTCATGCAGAGTACAGTGCAGCCAAAGTGCCTCACGGGAATGTGAAATCCTCCAACGTTCTTCTAGACAAGAACGGTGTTGCATGCATCTCAGACTTCGGGTTATCACTCCTCCTAAACCCGGTTCACGCCATTGCACGGTTGGGAGGGTATAGAGCCCCGGAACAGGAACAGAACAAGAGGCTATCTCAGCAGGCTGACGTATACAGTTTTGGAGTATTGTTGTTGGAGGTTCTCACAGGAAGAGCTCCTTCATTGCAGTACCCTTCACCGGCTCGTCCCCGAATGGAGGAAGAGCCGGAGCAGGCTACGGTGGACCTTCCAAAATGGGTTCGGTCGGTGGTGAGGGAAGAGTGGACTGCAGAGGTGTTTGATCAGGAGCTGTTGCGCTACAAGAACATTGAGGAAGAACTTGTGTCCATGCTGCATGTAGGGTTGGCTTGTGTGGCGGCGCAACCGGAGAAGAGGCCTACCATGGAGGAAGTTGTGAAGATGATTGAGGAGATCAGGGTGGAGCAATCACCTCTTGGGGAGGACTATGACGAATCGCGTCATTCACTTTCGCCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 2058 0.5068 MMMKHYHVLFMFLFFLPIFTLSLHHNDTHALTLFRRQSDLHGYLLSNWTGGDACIAAWRGVLCSPNGRVTALSLPSLNLRGALDPLTPLTHLRLLNLHDNRLNDTISLLFSNCTNLQLLYLSSNDFSGEIPPEISSLKSLLRLDLSDNNLRGKVDVISNLTQLITLKLQNNLLSGEIPDLSSSMKNLKELNMTNNEFYGHLPSPMLKKFSSTTFSGNEGLCGATPLPGCSFTTTPPKDNGNNNNNEKEPSSQTTVPSNPSSFPETSVIARPGKEQRHRGLSPGAIVAMVVANCVALLVVASFVVAHCCARGRGSSLVGSRESYGKRKSGSSYNGSEKKVYGGGESDGTSGTNRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRVVLNDGCIVAVKRLKDANPCARHEFEQYMDVIGKLKHSNVVRLKAYYYAKEEKLLVYDYLSNGCLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQNKRLSQQADVYSFGVLLLEVLTGRAPSLQYPSPARPRMEEEPEQATVDLPKWVRSVVREEWTAEVFDQELLRYKNIEEELVSMLHVGLACVAAQPEKRPTMEEVVKMIEEIRVEQSPLGEDYDESRHSLSPSIPTTEDGLA 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00599 685 PANTHER LRR RECEPTOR-LIKE KINASE 8 675 - -
Gma10g00599 685 MobiDBLite consensus disorder prediction 659 685 - -
Gma10g00599 685 SUPERFAMILY Protein kinase-like (PK-like) 376 653 IPR011009 -
Gma10g00599 685 MobiDBLite consensus disorder prediction 231 265 - -
Gma10g00599 685 MobiDBLite consensus disorder prediction 314 349 - -
Gma10g00599 685 Gene3D Ribonuclease Inhibitor 19 88 IPR032675 -
Gma10g00599 685 Gene3D Ribonuclease Inhibitor 89 235 IPR032675 -
Gma10g00599 685 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 675 - -
Gma10g00599 685 MobiDBLite consensus disorder prediction 231 277 - -
Gma10g00599 685 Pfam Protein kinase domain 376 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00599 685 SUPERFAMILY L domain-like 24 214 - -
Gma10g00599 685 Gene3D Phosphorylase Kinase; domain 1 345 447 - -
Gma10g00599 685 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gma10g00599 685 Gene3D Transferase(Phosphotransferase) domain 1 448 672 - -
Gma10g00599 685 ProSiteProfiles Protein kinase domain profile. 372 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00599 Gma-Chr10 6305397 6308326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00599 20 681 Receptor kinase-like Gene Family AT2G36570 64.785 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma10g00599 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00599 - - gmx:100804135 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00599 10 6305397 6308326 Gma10g00599 10 6305397 6308326 ECH
Gma10g00599 10 6305397 6308326 Gma13g01289 13 27282729 27285735 GST
Gma19g01797 19 47196875 47198995 Gma10g00599 10 6305397 6308326 PCT
Gma03g01745 03 43536658 43538969 Gma10g00599 10 6305397 6308326 PCT
Gma10g00599 10 6305397 6308326 Gma19g01797 19 47196875 47198995 PCT
Gma10g00599 10 6305397 6308326 Gma03g01745 03 43536658 43538969 PCT