Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00598 ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTCCTCCGCGATGACACCCACCACCACCTCCACCAGCCCTACGCGCCGCACCACCACCACTTCTCCCCCTCCGCCGTCTCCGTCGCCTCCGCCTCCTCCGTGCCGCCTAAACCCGCCGCCGCCGCAGACGACGACGCCGAGGACTTCTCCAACCCCTTCGACGAAGACGACGACGGCGAGAAGCGCAAGGAGCGCGACGAGATCGGCGAGGGAGCCGCCTCGTACGGATTCAACAACAAGAGATCTAAGACGACGGCTCCGTCGAACGGCGTCGGCGCCGTATCCGGCGGCGCCGAGTACCGCAAGGACCGGGAGGAGTGGAGCGACACGGCGATTGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACGCAGTTGAACCGGGGGAACCTGAGGGGAAGGGATTGGGAGGAGGTTGCGGCGGTGGTGAGCGAACGGTGCGAGAATCAATCAAAGAGCGTTGAACAGTGTAAAAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACACAGAATGAGCAGTGGCTGCATTTCCACCAGCCACTGGCCTTGGTTCAAGCAATTGGAACAGATCGTCGGAAATTCTCTCCCGGCGAAGTTCTCCGACGAGGATAAAGCGGTCATTTCAGCCGGAACTTCTCCCCGGCAATCGAAAAGATATGGAGTGGCAACACCCAGCACTGGAGGTCCAGCAAATAGCATGAAGTCCAAAGCATTGTCAAACAGTAGATGGCGGAGGGTAGTCCTCAAAATTAGTGGGGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCAATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGAGGCTTGGGTAAATGTGACAGGTTTAGAAAGATGTACTGCGTACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTCCAATCGACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAGGAGTTTGCTGAACCATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGGGTTGTTATATTTGGTGGCATTGGTTTTGGTGCTGGCACTCCTCTTTTCTCAACCGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCAGTTCTAAAGGGTACTAATGTAGATGGTGTATACGACTGCAACTCACGAGACAACAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTAGGTTCAAGAGGTGTCACCTCTATGGATATGTCAGCGCTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1494 0.5234 MASCDDDDDFSLLRDDTHHHLHQPYAPHHHHFSPSAVSVASASSVPPKPAAAADDDAEDFSNPFDEDDDGEKRKERDEIGEGAASYGFNNKRSKTTAPSNGVGAVSGGAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVISAGTSPRQSKRYGVATPSTGGPANSMKSKALSNSRWRRVVLKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGEAWVNVTGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGTPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00598 497 MobiDBLite consensus disorder prediction 66 81 - -
Gma10g00598 497 PANTHER URIDYLATE KINASE 65 497 - -
Gma10g00598 497 Gene3D - 118 181 - -
Gma10g00598 497 Coils Coil 158 185 - -
Gma10g00598 497 SUPERFAMILY Carbamate kinase-like 257 490 IPR036393 -
Gma10g00598 497 MobiDBLite consensus disorder prediction 88 102 - -
Gma10g00598 497 Pfam Myb/SANT-like DNA-binding domain 115 205 IPR044822 -
Gma10g00598 497 MobiDBLite consensus disorder prediction 21 108 - -
Gma10g00598 497 CDD AAK_UMPK-PyrH-Ec 259 491 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gma10g00598 497 MobiDBLite consensus disorder prediction 230 250 - -
Gma10g00598 497 Pfam Amino acid kinase family 260 470 IPR001048 -
Gma10g00598 497 Hamap Uridylate kinase [pyrH]. 256 491 IPR015963 GO:0005737|GO:0006221|GO:0033862
Gma10g00598 497 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 65 497 IPR011817 GO:0006221|GO:0009041
Gma10g00598 497 Gene3D - 248 496 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00598 Gma-Chr10 6299773 6304576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00598 99 209 Trihelix Transcription Factor Family AT3G14180 36.842 1.42e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma10g00598 AA_kinase 3.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00598 - - gmx:100805176 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00598 10 6299773 6304576 Gma10g00598 10 6299773 6304576 ECH
Gma10g00598 10 6299773 6304576 Gma13g01288 13 27277205 27282268 GST