Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00596 ATGTTCTTGTGCACCCTTTTGGCACTGTTCAACTATTCGATTAAAGGGTTGTGGAATGTTCTCTGGGTTGGTAGGAGTGGAAAGCCCTTTACAACAGCAACAACAGGAACAAAACCCTCACCATTTGCAACACCATCCCCAAATGGGTACCCTCCTTTTTTATCCAAGACTAAACAACAACAGCAACAGCAACAGCAACAAAGCTCTTTCAGTGATGATGATGAGCCAGGGTCTGCTGATGATGACCCCAAGAAGAAGGTCTCACCATGGCAGAGAATGAAGTGGACTGATACCATGGTGAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAAGCTGGCTCTGAAGGGACTGATAAGAAGAAAGCCTCTGGTTTGATGCAGAAGAAAGGGAAGTGGAAATCGGTTTCAAGGGCTATGATGGAGAAGGGGTTCTATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAGTGACTTGAACAAGAGGTATAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAACTTGTTGGATTCAATGGACTTGTCTCCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAGGCACTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGAAATGGGAATAACAATGCTCCACAGCAAGGAGAGTCTGGTGGTGAAGTGTCTcagcctcagtctcagtctcaggctcaacctcatcatcaacagcagcagcaaccgcagcaacAACGATGTTTTCATTCATCAGAGGTGGCAAATTTGGGGGGTTCAGGTGTGGAGGGTTTGAGGGTGTTGAAAGTGGGAAATGGGGAAGAGGGTgatgatgatgaggatgaggatgatgatgaatccgaggatgattcggatgaggatgaagatgattTGGGAGAAGGTGGTTCGAGGGGTCATGTGGGGCATGGACATGAAGACATTGAGGATGAGAATGATGGAAGGACAATGAGGAAGAGGGCAAGGAAAGTAGGAGGAGGGGTTTCCAATTCTCTGTCACCACAGACGATGCAGCAACTGAGTGCTGAAGTGACTGGCATGTTCCAAGACGTAGGTAAGAGTGCTTGGGACAAGAAACAATGGATGAGGAATAGGATGAAGCAGTTGGAGGAGCAGCGAATAAGCTACCATACACAAGCATTTGAGTTGGAGAAACAAAGGCTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCCAAACTTGAAAATGAAAGAAGGAAGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAGCTTGaattgatgggtcttcaaccccaacaacagcagcatcagcaacaacaacaacaTTCTTCCACCTAG 1404 0.4017 MFLCTLLALFNYSIKGLWNVLWVGRSGKPFTTATTGTKPSPFATPSPNGYPPFLSKTKQQQQQQQQQSSFSDDDEPGSADDDPKKKVSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDKKKASGLMQKKGKWKSVSRAMMEKGFYVSPQQCEDKFSDLNKRYKRVNDILGKGTACRVVENQNLLDSMDLSPKMKEEVKKLLNSRHLFFREMCAYHNSCGNGNNNAPQQGESGGEVSQPQSQSQAQPHHQQQQQPQQQRCFHSSEVANLGGSGVEGLRVLKVGNGEEGDDDEDEDDDESEDDSDEDEDDLGEGGSRGHVGHGHEDIEDENDGRTMRKRARKVGGGVSNSLSPQTMQQLSAEVTGMFQDVGKSAWDKKQWMRNRMKQLEEQRISYHTQAFELEKQRLKWARFSSKKEREMERAKLENERRKLENERMVLLIRQKELELMGLQPQQQQHQQQQQHSST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00596 467 Coils Coil 385 405 - -
Gma10g00596 467 Coils Coil 413 442 - -
Gma10g00596 467 Gene3D - 95 166 - -
Gma10g00596 467 PANTHER F16F4.11 PROTEIN-RELATED 60 467 - -
Gma10g00596 467 MobiDBLite consensus disorder prediction 33 90 - -
Gma10g00596 467 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 60 467 - -
Gma10g00596 467 MobiDBLite consensus disorder prediction 312 339 - -
Gma10g00596 467 Pfam Myb/SANT-like DNA-binding domain 92 215 IPR044822 -
Gma10g00596 467 MobiDBLite consensus disorder prediction 50 73 - -
Gma10g00596 467 MobiDBLite consensus disorder prediction 224 262 - -
Gma10g00596 467 MobiDBLite consensus disorder prediction 284 353 - -
Gma10g00596 467 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00596 Gma-Chr10 6284317 6285882 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma10g00596 Myb_DNA-bind_4 3.7e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00596 - - gmx:100798278 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00596 10 6284317 6285882 Gma10g00596 10 6284317 6285882 ECH
Gma10g00596 10 6284317 6285882 Gma13g01286 13 27260612 27262434 GST
Gma19g01795 19 47180735 47182637 Gma10g00596 10 6284317 6285882 PCT
Gma03g01743 03 43521915 43523282 Gma10g00596 10 6284317 6285882 PCT
Gma10g00596 10 6284317 6285882 Gma19g01795 19 47180735 47182637 PCT
Gma10g00596 10 6284317 6285882 Gma03g01743 03 43521915 43523282 PCT