Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00594 ATGGAGGGGAATTATGGGAGCACAAGACGTTATGTTCCCCGAGCAGATTCTTCCTTGAGCTTCCTTTACAACTACAACTACACCCCTTATCCAGGAATGGAAGTGAAGCAACAAACACTGGCTGGCACAAGTTCATCCATGGAAAAAATGAACTGCGGGAACCAGGAGAAGAAGAAGCGATTAACAAGTGACCAGTTAGATTCGTTGGAGAATAGTTTTCAGAAGGAGATCAAGTTAGATCCTGATAGGAAGATGAAGCTTTCCAAGGAGTTAGGGCTTCAACCTCGCCAAATTGCTGTTTGGTTCCAAAATAGGCGTGCAAGGTGGAAGAACAAGCAACTTGAGCACTTGTACGATTCGCTTAAACAGGAATTTGATGTCATATCCAAGGAAAAACAGAAGCTCGGGGAAGAGGTAATGAAGTTGAAGACTATGCTGAGAGAGCAAGCTTCTAGAACCCAACAACAAGTGTCAACAGGATACACAGAAATCTCTGGGGATCAAGAAACAGTGGAAAGCACGTCAGAGGCACTGCGTTGCTCCAAACGCGGAACACTGCACCAGCAGCAGCAGAATAATAATAATATTGGAGAAGGAAACTGTTCCTTCACTTTGGAAGATCATTACAACACAGTGCCAGTACCCTATTGGCCTGGGGTCCCTTATTATCATCCCTAA 678 0.4454 MEGNYGSTRRYVPRADSSLSFLYNYNYTPYPGMEVKQQTLAGTSSSMEKMNCGNQEKKKRLTSDQLDSLENSFQKEIKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKNKQLEHLYDSLKQEFDVISKEKQKLGEEVMKLKTMLREQASRTQQQVSTGYTEISGDQETVESTSEALRCSKRGTLHQQQQNNNNIGEGNCSFTLEDHYNTVPVPYWPGVPYYHP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00594 225 Coils Coil 104 138 - -
Gma10g00594 225 SUPERFAMILY Homeodomain-like 43 114 IPR009057 -
Gma10g00594 225 Gene3D - 48 117 - -
Gma10g00594 225 SMART HOX_1 55 116 IPR001356 GO:0003677
Gma10g00594 225 Pfam Homeobox associated leucine zipper 112 146 IPR003106 GO:0006355|GO:0043565
Gma10g00594 225 ProSiteProfiles 'Homeobox' domain profile. 52 112 IPR001356 GO:0003677
Gma10g00594 225 PRINTS Lambda-repressor HTH signature 83 92 IPR000047 GO:0003677
Gma10g00594 225 PRINTS Lambda-repressor HTH signature 92 108 IPR000047 GO:0003677
Gma10g00594 225 MobiDBLite consensus disorder prediction 151 170 - -
Gma10g00594 225 Pfam Homeodomain 57 111 IPR001356 GO:0003677
Gma10g00594 225 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 7 215 IPR045224 GO:0003700
Gma10g00594 225 CDD homeodomain 57 113 IPR001356 GO:0003677
Gma10g00594 225 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 7 215 - -
Gma10g00594 225 ProSitePatterns 'Homeobox' domain signature. 87 110 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00594 Gma-Chr10 6235080 6237197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00594 53 157 Homeobox Transcription Factor Family AT2G36610 64.602 1.65e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma10g00594 Homeodomain 5.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00594 - - gmx:100794565 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00594 10 6235080 6237197 Gma10g00594 10 6235080 6237197 ECH
Gma10g00594 10 6235080 6237197 Gma13g01284 13 27230177 27232157 GST
Gma10g00594 10 6235080 6237197 Gma19g01793 19 47160909 47162670 PCT
Gma10g00594 10 6235080 6237197 Gma03g01741 03 43503463 43505284 PCT