Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00583 ATGAAACTCTCTGTTTTCCACCATCAGCACCATCCTATGATTCTCAATTGCCCCCTTACCTTGACAAGAACACACAAAAGACTTAACAACAAAGGTTCATATAGGTGGTTACCATGCCACTGCTCACATTCTTCCACAAATAAAATTGCTGCTGAACCAGTTACGGTGTCTTTAAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGTTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGGGGAGCCAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGTTTGAAGTACTATGATTTGAAGGTTGGGAATGGAGCTGAGGCTAAAAAGGGATCCCGTGTTGCAATTCACTATGTTGCCAAATGGAAGAGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGGGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAAGGCATGCGGGTAGGAGGCCAGCGACTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAAGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGTTGGACATTGAATTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCAGTAAAGATAGTTGAAGGTTAA 702 0.4345 MKLSVFHHQHHPMILNCPLTLTRTHKRLNNKGSYRWLPCHCSHSSTNKIAAEPVTVSLSIEGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00583 233 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 122 217 IPR001179 GO:0003755
Gma10g00583 233 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 10 233 - -
Gma10g00583 233 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 126 220 IPR001179 GO:0003755
Gma10g00583 233 SUPERFAMILY FKBP-like 97 220 - -
Gma10g00583 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 10 233 - -
Gma10g00583 233 Gene3D - 86 224 IPR046357 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma10g00583 Gma-Chr10 6116317 6120560 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00583 115 219 Calmodulin-binding Proteins AT5G48570 32.727 1.69e-07 49.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00583 - - gmx:100305843 473.781
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00583 10 6116317 6120560 Gma10g00583 10 6116317 6120560 ECH
Gma10g00583 10 6116317 6120560 Gma13g01277 13 27131427 27136117 GST