Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00563 ATGGAAGTTGAAATAATCTCCACTCAGTGCATCAAACCCTCTTGCACAACACCAAATCACCCAAATACATATAATCTCTCAATCTTAGACCAGTTCATGCCTTCTATATACATACCAATGGTTCTTTTCTACTCTTTTGCTCAGAGTTCTCAAGCCAATATTGACAGTACTATAACTCAACAAAGATTGAAACAATTAAAGGAATCATTATCACAAGTCTTGACTCATTTTTACCCATTCGCTGGAAGGGTTAAGGACAAGTTTACCATCGATTGCAATGATGAAGGGGTTCACTACACCGAGGCCAAAGTAAGTTGCACTCTAGCTGAATTTTTCAACCAACCTAATTTCTCGTCGCTTATCCATAAACTTGTTCCAAATCAACCAATTATGGAATTAGCGACCGAAGGGTACACAGCCATGGTACAAGTGAATTGTTTTGCATGTGGTGGCATGGTGATAGGTACCTTGATATCTCACATGATAGCGGATGGAGCAGGTGCAAGTTTCTTTTTAAATAGTTGGGGTTCTAATTCTAACTTTTCTCATCAAGATGCATTTGATCAATTTCCAAACTTTGATACCCCTTTCCCTCAGAATAATAATAATTATGCATGCCCACATGACACAAATGTGATGAATTTGTGTGGCCAATTTTTGAACGAGGGTAGGGTTGCTATGAGGAGGTTTTTATTTGATGCTGAAGCTATTTCGAGGTTAAGGGCTCAAGGGTCTAGTTTAACCGTGCAAAACCCTACTCGAGTGGAGGTAGTAACATCCCTTCTATGCAAATGTACTGCAAAAGTTTTCAATGCAAACTTTGGTTTAGAGAGGCCTACTTTGATAACTCATGCGGTAAATATGCGTAGAAGGGCATCTCCTATGTTTCCAAAATCGTGTATGGGTAATTTTGCATGGTTGGCTTTGGCTTTAATAATGAGTTCAAAGGACAACAAGGTAATAATGGAGTTATTACCTGACTTGGTTGTTAAATTGAGGGAAGCAGTGTCAAGTATCAACTCAGATTTTGTGAAAGGCTTCGAAGGTGATGAAGGGTATGCTAAATATTGTGAAGTTTCAAAAGAGTTAATTGAGAAAGCATCGAGTTTTGCTGCAACGACCACAAGTGGGGTTAATTACGTTCATTTTACGAGTTGGTGCAACTTTGGACTTTATGACGTTGATTATGGATGGGGAAAACCAATTTGGGTGTCTTGTGTGGCTGATTCAGTTGACGATTCTATGTTTTTTAACGCGGTCATACTAATGGATACACCTTCAGGAAATGGAATTGAATGTTGGGTTTACTTGAATGAAGATGAAATGGCCATATTGCAACAAGACAAGGAGCTCCTTGCTTTTTCAACCTTAGATCCAAATCCTCAGCAACTAAAGGATTAA 1401 0.3876 MEVEIISTQCIKPSCTTPNHPNTYNLSILDQFMPSIYIPMVLFYSFAQSSQANIDSTITQQRLKQLKESLSQVLTHFYPFAGRVKDKFTIDCNDEGVHYTEAKVSCTLAEFFNQPNFSSLIHKLVPNQPIMELATEGYTAMVQVNCFACGGMVIGTLISHMIADGAGASFFLNSWGSNSNFSHQDAFDQFPNFDTPFPQNNNNYACPHDTNVMNLCGQFLNEGRVAMRRFLFDAEAISRLRAQGSSLTVQNPTRVEVVTSLLCKCTAKVFNANFGLERPTLITHAVNMRRRASPMFPKSCMGNFAWLALALIMSSKDNKVIMELLPDLVVKLREAVSSINSDFVKGFEGDEGYAKYCEVSKELIEKASSFAATTTSGVNYVHFTSWCNFGLYDVDYGWGKPIWVSCVADSVDDSMFFNAVILMDTPSGNGIECWVYLNEDEMAILQQDKELLAFSTLDPNPQQLKD 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00563 466 Gene3D - 1 205 IPR023213 -
Gma10g00563 466 Pfam Transferase family 1 451 - -
Gma10g00563 466 Gene3D - 224 455 IPR023213 -
Gma10g00563 466 PANTHER F21J9.9 2 463 - -
Gma10g00563 466 PANTHER VINORINE SYNTHASE-LIKE 2 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00563 Gma-Chr10 5892688 5894088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00563 1 447 Monolignol Biosynthesis Gene Families AT5G48930 21.656 2.05e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00563 - - gmx:100792475 955.666