Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00534 ATGTTATCATTGGCTTTCATACACCATGTTATCACAGGTCGTTGGTTCATGATCTTTGCATCATGTCTTATCATGGCAGTTTCAGGAGCAACCTACATGTTTGGTTTGTACTCAAACGAGGTCAAAGCCTCTTTAGGGTATGACCAATCAACCCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCAAACCTTGGAATTTTTTCAGGGTTAATCAATGAGATAAGCCCTCCATGGGTGATCCTAGCCATGGGAGCCACCATGAACTTCATTGGCTACTTCATGATATGGCTCTCGGTCACCTCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTCTATTTTTACATTGGTGCAAATTCTCAGTCTTTTGCCAACACTGGTGCTTTGGTTAACTGTGTCAAGAGCTTCCCTAGAAGCCGTGGAAGTGTCATTGGTCTTCTTAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGTTTTACCATGCTTTCTATGGTGATGACTCTAAGGCTCTTATTTTTCTCATTGGGTGGCTTCCTGCTGCTATTTCCTTCATTTTTCTTCCAACGGTTAGGGTGTTGAGTATCACCCCACAACCAAAAGAGATTAAGTTGAGTTTCACAAGGGTGGAGTTCATAGTGGATGGCATGGTGGTTCTTTTATTACTTCTTCTCCCACTTGGTATCGTGTTTAAAGAAGAATTCAAAATTTGGAAGAACCAAAACCAAAACTTCACTGATGCTGCTGCTTCAGTTGTTGAATTGTCACAGCCAGAAGAAGCACCATCTCATTCAGAAAGGAAAAACAACAACTCATGCTTGAAGAACGTTTTCAAGCCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCTCTCTTCAGCATTGACATGTTAATTCTGTTCATTGCAACAGTTTTTGGTGTTGGTGGAACACTAACAGCACTTGACAATTTAGGACAGATTGGGAACTCATTAGGGTACCCCAAAAAGAGCCTCACAACTTTTGTGTCCCTTGTGAGCATATGGAACTATTTGGGAAGAGCATCTTCGGGCTTTGTTTCTGAGTACTTATTGACCAAATACAAGTTCCCTCGTCCCTTGTTGCTCACTCTAGTCATGCTTCTATCTTGTGTTGGCCACATTCTAATAGCCTTTGGTATTCCAAACTCTCTTTACTTCTCCTCAGTGATTATCGGGTTTTGCTTTGGGGCCATATGGCCGTTAATGTTTGCCATCATATCTGAAATATTTGGCCTCAAATACTACTCCACTTTGTACAATTTTGGGGCAGTGGCAAGCCCTGTTGGCTCTTACATTCTCAATGTGAGAGTGACCGGTTATTTGTATGATAAAGAGGCTTTGAAGCAATTGGGGGTGAAGGGACTCATAAGGCAAAAGGGGAAGGACTTAACTTGTGTGGGAGTGCAATGCTATAGGATGGCTTTTCTCATAATCACTGCTTCAACTTTGGTTGGTTGTGTTGTTTCTTTTATTCTTGTGTTGAGGACTAGAAATTTTTACAAAGGTGACATTTATGAGAAGTTCAGAGTTGTTGAACTAGACACAGGAGAAAGTCTTCCAACTTTTGGCAGCACTGGCACCACCACTACCACCACAAACCGCACTGAAGAACCAGATAAAATCAATAGGAAATAA 1668 0.4203 MLSLAFIHHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKASLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFIGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQFYHAFYGDDSKALIFLIGWLPAAISFIFLPTVRVLSITPQPKEIKLSFTRVEFIVDGMVVLLLLLLPLGIVFKEEFKIWKNQNQNFTDAAASVVELSQPEEAPSHSERKNNNSCLKNVFKPPKRGEDYTIFQALFSIDMLILFIATVFGVGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRASSGFVSEYLLTKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGFCFGAIWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRVTGYLYDKEALKQLGVKGLIRQKGKDLTCVGVQCYRMAFLIITASTLVGCVVSFILVLRTRNFYKGDIYEKFRVVELDTGESLPTFGSTGTTTTTTNRTEEPDKINRK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00534 555 SUPERFAMILY MFS general substrate transporter 15 513 IPR036259 -
Gma10g00534 555 Pfam Nodulin-like 14 201 IPR010658 -
Gma10g00534 555 PANTHER MFS TRANSPORTER 5 208 - -
Gma10g00534 555 PANTHER MFS TRANSPORTER 207 545 - -
Gma10g00534 555 CDD MFS_Mch1p_like 13 497 - -
Gma10g00534 555 MobiDBLite consensus disorder prediction 532 546 - -
Gma10g00534 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 208 - -
Gma10g00534 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 207 545 - -
Gma10g00534 555 MobiDBLite consensus disorder prediction 532 555 - -
Gma10g00534 555 Gene3D MFS general substrate transporter like domains 289 510 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00534 Gma-Chr10 5508917 5510737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00534 9 520 Nodulin-like Gene Family AT2G39210 60.474 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00534 - - gmx:100782396 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00534 10 5508917 5510737 Gma20g01091 20 37586431 37588425 ECH
Gma10g00534 10 5508917 5510737 Gma10g00534 10 5508917 5510737 ECH
Gma10g00534 10 5508917 5510737 Gma13g01248 13 26791942 26793828 GST
Gma19g01752 19 46826792 46828918 Gma10g00534 10 5508917 5510737 PCT
Gma03g01699 03 43170764 43172794 Gma10g00534 10 5508917 5510737 PCT
Gma10g00534 10 5508917 5510737 Gma19g01752 19 46826792 46828918 PCT
Gma10g00534 10 5508917 5510737 Gma03g01699 03 43170764 43172794 PCT