Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00529 ATGGCATCAGAAGCAAATGCTGCCAACACCAACTTCTGTGTAAATGTTAGCAACAATGGCTACATTAGTGCTAATGACCCCTTGAACTGGGGTGCGGCGGCGGAGGCTATGGCTGGGAGCCACCTCGACGAGGTCAAGCGCATGCTAGAGGAGTACCGGAGGCCCGTCGTCAAGCTCGGTGGAGAGACCCTGACCATCTCGCAGGTCGCGGCGATCGCGGCCCACGACCAGGGGGTGAAGGTGGAGCTGGCGGAGTCCTCCAGGGCCGGTGTTAAGGCCAGCAGTGACTGGGTGATGGAGAGCATGAACAAGGGCACTGACAGCTACGGCGTCACCACCGGGTTCGGTGCTACCTCCCACCGGAGAACCAAACAGGGCGGTGCCTTGCAGAAGGAGCTAATTAGGTTTTTGAATGCTGGAATATTTGGCAATGGTACAGAGTCCAATTGCACCCTACCCCACACAGCAACCAGAGCAGCTATGCTAGTGAGAATCAACACACTCCTCCAAGGCTACTCAGGAATCAGGTTTGAAATTTTGGAGGCAATCACAAAGCTTCTGAACAACAACATTACCCCATGTTTGCCACTTAGGGGAACAATCACAGCATCTGGTGATCTTGTTCCTTTGTCCTACATTGCTGGTTTGCTAACTGGTAGACCAAACTCCAAGGCTGTTGGACCCTCTGGTGAGATTCTGAATGCCAAAGAAGCCTTTGAATTGGCCAACATCGGTGCTGAGTTCTTTGAGTTGCAACCTAAGGAAGGCCTTGCCCTTGTGAATGGCACTGCTGTTGGTTCTGGCTTGGCCTCAATTGTTCTATTTGAAGCCAACATCATTGCTGTCTTGTCTGAAGTTATTTCAGCAATTTTTGCTGAAGTTATGCAAGGAAAGCCTGAATTCACTGACCATTTGACTCATAAACTAAAGCACCACCCTGGTCAGATTGAAGCTGCTGCTATTATGGAACACATTTTGGAAGGAAGCTCTTACGTGAAAGCTGCTAAGAAGTTGCATGAGATTGATCCTTTACAAAAGCCTAAACAGGACCGTTATGCTCTTAGGACTTCACCACAATGGCTTGGTCCTCTAATTGAAGTGATTAGATTCTCTACCAAGTCAATTGAGAGGGAGATTAACTCAGTCAATGACAACCCTTTGATTGATGTGTCAAGGAACAAGGCACTTCATGGTGGTAACTTCCAAGGAACTCCTATTGGAGTCTCCATGGATAATACACGTTTGGCTCTTGCTTCAATTGGTAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGATTATTACAACAATGGTTTGCCTTCAAATCTCACTGCCAGCAGAAACCCCAGCTTGGATTATGGATTCAAGGGAGCTGAAATTGCCATGGCATCTTATTGTTCTGAACTTCAATATTTGGCGAATCCGGTGACAAGCCACGTGCAAAGCGCGGAGCAACACAACCAAGATGTGAACTCTCTGGGGCTGATTTCATCAAGGAAGACTCATGAGGCTATTGAGATCCTCAAGCTCATGTCCTCCACTTTCCTGGTCGCCCTTTGCCAAGCCATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAACACGGTCAAGAACGTTGTGAGTCAAGTTGCTAAGAGGACTCTCACCACAGGTGTCAATGGAGAGCTTCACCCTTCAAGGTTTTGTGAGAAGGACTTGCTCAAGGTTGTTGATAGGGAGTACACATTTGCATACATTGATGACCCCTGCAGTGGAACATACCCTTTGATGCAAAAGCTAAGGCAAGTGCTTGTGGACTATGCATTGGCCAATGGAGAGAACGAGAAGAACACAAACACATCAATCTTCCAAAAGATTGCAACATTTGAGGAAGAGTTGAAGACCCTTTTGCCTAAGGAAGTGGAAGGTGCAAGAGTTGCATATGAGAATGACCAATGTGCAATTCCAAACAAGATCAAGGAATGCAGGTCTTACCCCTTGTACAAGTTTGTGAGAGAGGAGTTGGGGACAGCATTGCTAACTGGTGAAAGGGTTATCTCACCGGGTGAAGAGTGTGACAAAGTGTTCACTGCTTTGTGCCAAGGGAAGATCATTGATCCACTTTTGGAATGCCTTGGGGAGTGGAATGGGGCACCTCTTCCAATATGTTAG 2154 0.474 MASEANAANTNFCVNVSNNGYISANDPLNWGAAAEAMAGSHLDEVKRMLEEYRRPVVKLGGETLTISQVAAIAAHDQGVKVELAESSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFELANIGAEFFELQPKEGLALVNGTAVGSGLASIVLFEANIIAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILEGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTHEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNTNTSIFQKIATFEEELKTLLPKEVEGARVAYENDQCAIPNKIKECRSYPLYKFVREELGTALLTGERVISPGEECDKVFTALCQGKIIDPLLECLGEWNGAPLPIC 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00529 717 CDD PAL-HAL 62 527 IPR001106 -
Gma10g00529 717 Gene3D - 17 263 IPR024083 -
Gma10g00529 717 Pfam Aromatic amino acid lyase 64 544 IPR001106 -
Gma10g00529 717 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841
Gma10g00529 717 SUPERFAMILY L-aspartase-like 26 717 IPR008948 GO:0003824
Gma10g00529 717 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 706 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gma10g00529 717 Gene3D Fumarase/aspartase (Central domain) 264 712 - -
Gma10g00529 717 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 15 717 - -
Gma10g00529 717 Gene3D - 530 651 IPR023144 -
Gma10g00529 717 PANTHER HISTIDINE AMMONIA-LYASE 15 717 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00529 Gma-Chr10 5397352 5401828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00529 17 717 Monolignol Biosynthesis Gene Families AT2G37040 83.024 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00529 K10775 - gmx:100302735 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00529 10 5397352 5401828 Gma13g01241 13 26689587 26694407 GST
Gma19g01721 19 46527255 46531217 Gma10g00529 10 5397352 5401828 PCT
Gma03g01673 03 42844985 42848878 Gma10g00529 10 5397352 5401828 PCT