Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00526 ATGAAGTCAAGATTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGTGCCTTAACAAGTGCATATCTTGTGAGGACTGTTGTGAATGGGCTTTGTGGTCTTCTTCTAATTTTCATGAAGCTTGCTCCAACAATATTCCAAGTGATGTTCCAAAGGGTCATTTGGTTGTGTATGTGGGAGAGAACCACAAGAGATATGTGATCAAGGTTGCATTGCTCCACCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGATTTCATTGCTGATTCAAAACTATGCATTCCTTGTGATGAACACCTCTTCCTTAGTGTACTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTTTGTCTTTGA 378 0.4233 MKSRFLRGCLNKCKKMCLNKCISCEDCCEWALWSSSNFHEACSNNIPSDVPKGHLVVYVGENHKRYVIKVALLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00526 125 Pfam Auxin responsive protein 37 112 IPR003676 GO:0009733
Gma10g00526 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 125 IPR003676 GO:0009733
Gma10g00526 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00526 Gma-Chr10 5374877 5375254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00526 39 120 Calmodulin-binding Proteins AT4G34750 50.575 1.89e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00526 K14488 - gmx:102662255 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00526 10 5374877 5375254 Gma13g01238 13 26667074 26667560 GST
Gma19g01724 19 46558836 46559213 Gma10g00526 10 5374877 5375254 PCT
Gma03g01677 03 42894985 42895350 Gma10g00526 10 5374877 5375254 PCT