Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00525 ATGTGGGACACGTGTCCGGTTCCGCAGACTCGAAACTCGAAACGCACAATTTGGATGACAACCCACCCTTTTTCGGTTTCGAACATTCGGACGAATTTCTCTCTCTCTCTCTTCAATTCAACACTTGGAGGACATGAGATGGATCGGGAAGAATATTTGGGGAAGTGTTCCAATATGAAATGCCAAAGAGTGGATGAATCATATGTACATGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAATGATCATGCTTCCCTGGATGGTAGTTTGGATTCTCATACAACTTTGAATGGAAAGGATGATTTGGAACTGGAGGCCCTTGATGGATTGCTGGATGATGTTGAAATCAATGATCTTGAAGGAACTGTTGGTTTCCCTGGTGGTACATGTGAAGAATATTTTTTGGATTTTGGATTTGCTGACAAATTTGAGGAGGTACTAGGCTCTGGTCCTTTTGTAGGTTCACTCTTGCAAAACTCAAGTTCTGAAAGTCATTCTTCCGGATTAAGCGGAAGTAGCATTGTTGATGGGGTATTAGAATCAACAGAAGTACCTATTGCACAATCTGAATGCAAAAATGATTCTCTAGATGAGACAATAACCTATGAATCACATGGTGCCTTCAGGAACAATCCAAGTCAACCATCAAAAGTAAATTGCAGATACAACATTTCACTTGATATACAACATCTGCAAGATTTGGATAACAACCGTCATTTAGCTGGTGGTATATTGACTTGTAAGAAGGAAAAGGGTCCTGTTGAAAAAGGCCAACCTGCTGCACTTAGAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTACATTGAAGAATTTTCAAATTCAAGGTCAAAGGAAAAGGCACCAACTGCTGGTACAAAAACTAAATATTTAAGTGACTCATCATGTGATGATGTACTTCATATAAGAATTAAAGCATTCAAAAAGAGTCCAAGTGAAAAGTCTAGTATTGAAAATAGAGATGTGATGCTTCCTGAGTTGCAAGTTCACAAAGGGCGTCCGAAGAAAGAGAAACTTGAGTATGACATCGAGTCATTTCCCTTGGAATCTGAGGATGAATGGTTGACATCAAAAAGATCTAGAAGGAAAGATCGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGATGGACTGACATAAAGAGGTTTCTGTTTTCTTCTACAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGCACAGAAAAGCACGAGAGAGGCTGAACAAAATGACGAGCTTGCCCTGCGTCCCTTGCCATTTAATGTGGTACATCGTGTGCAAGAATTGGCTAAAATTCACCCATACCCTAGGGAACGTGGATCAAAGAAGTTGCGTGTTAGCCAAGCTGGCTCTTCTGTCATTGCTAAAGATTCTCCTCCCCTTAGTCTTAGCAAAAGAAATGTACGTAGGAAGTTTACTTAG 1533 0.4097 MWDTCPVPQTRNSKRTIWMTTHPFSVSNIRTNFSLSLFNSTLGGHEMDREEYLGKCSNMKCQRVDESYVHALQDEVMEVEHLLAEPRNDHASLDGSLDSHTTLNGKDDLELEALDGLLDDVEINDLEGTVGFPGGTCEEYFLDFGFADKFEEVLGSGPFVGSLLQNSSSESHSSGLSGSSIVDGVLESTEVPIAQSECKNDSLDETITYESHGAFRNNPSQPSKVNCRYNISLDIQHLQDLDNNRHLAGGILTCKKEKGPVEKGQPAALREKRFRKPTQRYIEEFSNSRSKEKAPTAGTKTKYLSDSSCDDVLHIRIKAFKKSPSEKSSIENRDVMLPELQVHKGRPKKEKLEYDIESFPLESEDEWLTSKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKRFLFSSTSYRTPIDLRDKWRNLLRASSAQKSTREAEQNDELALRPLPFNVVHRVQELAKIHPYPRERGSKKLRVSQAGSSVIAKDSPPLSLSKRNVRRKFT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00525 510 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 376 436 IPR017930 -
Gma10g00525 510 Pfam Myb-like DNA-binding domain 384 432 IPR001005 -
Gma10g00525 510 PANTHER TRF-LIKE 8 54 508 - -
Gma10g00525 510 SMART sant 381 434 IPR001005 -
Gma10g00525 510 CDD SANT_TRF 383 433 - -
Gma10g00525 510 SUPERFAMILY Homeodomain-like 384 452 IPR009057 -
Gma10g00525 510 MobiDBLite consensus disorder prediction 477 510 - -
Gma10g00525 510 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 54 508 - -
Gma10g00525 510 Gene3D - 370 482 - -
Gma10g00525 510 ProSiteProfiles Myb-like domain profile. 377 432 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00525 Gma-Chr10 5363836 5370267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00525 383 432 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 2.59e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00525 - - gmx:100777720 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00525 10 5363836 5370267 Gma13g01237 13 26657486 26663224 GST