Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00524 ATGAGGAACTGTGCATCATGGCTCCCTCTTCTTTTCACGTTGATCCCTCTCCTCGCGTCGCGGATTCGATGCGCCGACAACAACTTTGCACCCTCCTTTTACTCCGAAGAAATCTACAAGGAGCTTCAAAACCTCGCTTCCCTGTTAAACAAGGACATTAAAGCAGGTTTAGGTTTCTGCATCAAGGATGTGAATAAAGATTGGGAGGAAGCATTTGATTTTAAAGGAAGGTTGGATTTCGTGGATTCTTGTGTTAAAAAAAAAGGGGATTTCAGAGATAGAATATGTACCGCGGCTGAAGTAAGGTACTATTTCCATGGTTTCTTGGAACAAGCGGCATCATCCACTAATTACGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGAGTTGTAGTTCTGGCAAAAATGTTGACTTAAAAAAGGATGTAAAGGAGATTCCTTTTAGAACAAGTAACTGTCAGCCTTGTTGTGAAGGGTTTTTCTGCCCTCAAGGATTGACTTGCATGATACCTTGCCCGCTAGGTTCTTATTGTCCACTTGCAAAACTGAACAATTCAACCGGAATATGTGACCCATATAGTTACCAGATACCTCAGGGAGATACAAATCATACTTGTGGCAGTGCTGATATTTGGTCTGGTGTGATGAACAATAGTGACATCTTTTGTTCTCCAGGATCCTACTGCCCAACTACAACACGCAAAGTTTCTTGTGATAGTGGATATTATTGCAGGATGGGTTCTACTCACCAAAATCCATGTTCCAAGTTGAGTACCTGTAATCCAAACACAGCAAACCAAAATATGCATGCTTATGGCGCTTTGCTTATTGTTGCATTGAGTACTCTCCTGATCTTCATTTATAATTGTTCTGATCAAGTTCTAGTTACTCGAGAAAGGAGAAAGGCTAAATCCAGGGAATCTGCTGCTAGACAAGTAAGAGAAACTGTACAAGCCCGAGAAAGGTGGAAAATAGCAAAAGATGTTGCTAAGAAAGGTAGAGGGGGATTGCAAGAGCAATTGTCTCGTACTTTTTCTCGCAAAAAATCGTTAAAGCAACCAGATCATTCTAGCCAAGCTAAACGTGGTACGGGCGATACATTTTTGCCACCAATGCCTCCAAATTCTTCAGGCATGTATGAGCAGCCATCAGCAGGTTCAAAGGCACAAAACAAGGAACCTACCAACCTTACTAAAATGTTGAATTCCTTCGAGGATGACCCGCATAGCAACGAAGGATTCAATCTACAAATTGGAGATAAAAATATTAAGAAGCAGATGCCAAAGGGCAAGAATTTACACACACAAAGCCAAATTTTAAGGTATGCTTATGGTCAGATAGAGAAGGAGAAAGCTCAACAAGAGAAGAACAAGGACTTGACTTTCTCCGGAGTTATTTCAATGGCGACTGAAGGCGATGTTCGAACAAGGCCTGTGATTGAGGTAGCTTTTAAAGATTTAACTCTTACTTTGAAAGGTAAAAGGAAACATATAATGAGATGTGTGTCTGGTAAACTCATGCCGGGTCGAGTTTCCGCTGTGATGGGTCCCTCTGGAGCTGGCAAAACTACATTTCTTTCTGCCTTGGCAGGGAAGACAAGAGGATGCACTATGACAGGCTCAATTCTAATCAACGGAAAGCCTGAATCCATTCATTGTTATCAGAAAATTATTGGTTATGTGCCACAAGATGATATTGTGCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGATATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTCCAGGCAGTGAGGGATTCCCTTGTTGGGACAGTAGAGAAGAGAGGTATATCTGGAGGGCAACGAAAGCGTGTAAATGTAGGGATGGAGATGGTTATGGAGCCTTCATTATTAATCTTAGATGAGCCTACAACTGGCCTAGACAGTGCATCTTCCACTTTACTACTTAAAGCACTTCGTCGCGAAGCACTTGAAGGGGTAAATATTTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATCTTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGCCCTGTTAAGAAAGTAGAAGAATACTTTGCCAGCATTGGCATCACCGTACCGGATCGCGTGAATCCTCCAGACCATTTTATCGACATTTTGGAAGGTTTAGTGAAACCAAATGGAAATGTGACCCATCAACAACTTCCTGTAAGATGGATGCTACATAATAGTTACCCAGTACCACCAGATATGCTTCATTTTGCTGATCAAATTGCTGCCTCCTCCTCCTCCTCCTCCACCTCAAATGTAAATGATGCAATAAAGGGTGCAGATGAAGCTGTTGATCAATCCTTTGCTAATGAGTTTTGGGAGGATATGAAGAGTAATGTTCAGATGCAAAGAGATCATATAGAGGCAACCTTCTTAAAGACTAAGGACTTATCAAATCGAAGAGCTCCCGGTGTATCTCGACAATATAGATATTACCTTGGGCGGATTTGTAAGCAGACACTACGGGAAGGAAAATCACAAGCAGTTGATTACCTTCTCTTATTAGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTAAATGATGAAACATTTGGGTCCCTTGGATATACCTATACCGTTATTGCTGTCTCTTTACTTTGCAAGATTGCAGCACTCAGAGCATTTTCTCTGGATAAATTACAATACTGGAGGGAGAGTGCATCAGGAATTAGCAGTCTGGCTCATTTCTTGGCCAAAGATACAATTGAACTTTTCAATATAATCATCAAACCTGTAGTTTATTTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGCTTCGGAAGTAATTACGCGGTTTTGGTCTGCCTTGTGTACTGTGTATCTGGCATGGCTTATGCAATAGCAATTTATTTTGAGCCTGCTCCAGCACAACTGTGGTCAGTGCTTCTCCCAGTTGTTATGACTCTCATTGCAAACCAGACAAGAGATACTGTCTTTATGAAGATCCTTGTAAAGTTGTGCTATCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTTTACTGGAGTGTGGCTGATAACTCGGTGTAGTTCACTAATGAATAGTGGCTATAATGTCAGCGACTGGCCTCTTTGTCTGGTTGCCCTCATTTTTTACGGTATAATTGCTCGAGTTGTGGCCTTCTTTTGTTTAGTGATCACTCAAAAGAAGTGA 3300 0.4127 MRNCASWLPLLFTLIPLLASRIRCADNNFAPSFYSEEIYKELQNLASLLNKDIKAGLGFCIKDVNKDWEEAFDFKGRLDFVDSCVKKKGDFRDRICTAAEVRYYFHGFLEQAASSTNYVKPNKNCNLTSWVSGCEPGWSCSSGKNVDLKKDVKEIPFRTSNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNSTGICDPYSYQIPQGDTNHTCGSADIWSGVMNNSDIFCSPGSYCPTTTRKVSCDSGYYCRMGSTHQNPCSKLSTCNPNTANQNMHAYGALLIVALSTLLIFIYNCSDQVLVTRERRKAKSRESAARQVRETVQARERWKIAKDVAKKGRGGLQEQLSRTFSRKKSLKQPDHSSQAKRGTGDTFLPPMPPNSSGMYEQPSAGSKAQNKEPTNLTKMLNSFEDDPHSNEGFNLQIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNKDLTFSGVISMATEGDVRTRPVIEVAFKDLTLTLKGKRKHIMRCVSGKLMPGRVSAVMGPSGAGKTTFLSALAGKTRGCTMTGSILINGKPESIHCYQKIIGYVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFASIGITVPDRVNPPDHFIDILEGLVKPNGNVTHQQLPVRWMLHNSYPVPPDMLHFADQIAASSSSSSTSNVNDAIKGADEAVDQSFANEFWEDMKSNVQMQRDHIEATFLKTKDLSNRRAPGVSRQYRYYLGRICKQTLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRAFSLDKLQYWRESASGISSLAHFLAKDTIELFNIIIKPVVYLSMFYFFSNPRSSFGSNYAVLVCLVYCVSGMAYAIAIYFEPAPAQLWSVLLPVVMTLIANQTRDTVFMKILVKLCYPNWALEAFIIANAERFTGVWLITRCSSLMNSGYNVSDWPLCLVALIFYGIIARVVAFFCLVITQKK 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00524 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 714 IPR027417 -
Gma10g00524 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 1095 - -
Gma10g00524 1099 Pfam ABC-2 type transporter 689 1099 IPR043926 GO:0140359
Gma10g00524 1099 MobiDBLite consensus disorder prediction 387 401 - -
Gma10g00524 1099 Pfam ABC transporter 511 659 IPR003439 GO:0005524
Gma10g00524 1099 SMART AAA_5 517 709 IPR003593 -
Gma10g00524 1099 CDD ABCG_EPDR 489 715 - -
Gma10g00524 1099 Gene3D - 482 729 IPR027417 -
Gma10g00524 1099 ProSitePatterns ABC transporters family signature. 632 646 IPR017871 GO:0005524
Gma10g00524 1099 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 28 1095 - -
Gma10g00524 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 732 IPR003439 GO:0005524
Gma10g00524 1099 MobiDBLite consensus disorder prediction 338 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00524 Gma-Chr10 5337363 5348566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00524 518 711 Calmodulin-binding Proteins AT2G36910 28.218 1.14e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00524 - - gmx:100780238 2197.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00524 10 5337363 5348566 Gma13g01236 13 26641107 26651996 GST