Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00523 ATGAAGTGTTTTTCATTCTACTTTGGAGAGAAGAAGGATGGTCACAAGAGCTTGCAGTCAATATTGAGCCGGTTCAACAGTTCTACTTATGTTGAGGCTGAAATGAGAAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACAACAGCACAGACTCCCTTAGGAGAAGTTCTTTTCCCAGTTTGTCCCAAAGACCCAGCAACCTTAGAGTATTTACTGTATCTGAACTGAAAACAGCCACAAAGAGTTTTAGTCGCTCTGTCATGCTTGGAGAAGGGGGGTTCGGATGTGTCTACAAGGGGTTGATCAAGAGTGTAGATGATCCTTCCACAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGACGAGGAATTCAGGCAAGGTTTTGTTTTGCCTTCTATGGGCATAAGGAATGGGTGACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCCAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCTAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAAATCCTCTCCCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCGGCTCGTGGCTTAGCATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGACGAGCAGTGGAATGCAAAGCTGTCAGACTTCGGGCTAGCTAGATTGGGACCATCTGATGGGTTGACTCATGTCTCCACAGCGGTCGTAGGAACAATGGGTTATGCAGCTCCAGAATATGTTCAAACTGGACGTCTCACGTCAAAGATTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCATCCTATTGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGGTAAGGCCATACCTTTCAGATAGAAGGAAATTTCAACTAATATTGGATCCAAGACTTGAGAGAAAACACATCTTGAAGTCAGCACAAAAACTTGCTATAATAGCTAACAGATGCTTGGTCAAAAACCCAAAGAATCGCCCGAAGATGAGTGAAGTGTTGGATATGGTGACTCAGGTTGTGGAGTCTACAGTGAGTACTAATCAACAGCCACCCTTGAAGAGTGTAGCTGCCTCAGCAGAAGCTTCTCAGGGTACTAAAGTAAAGAACAAAAAAGTGACCATGGATCAAAATCCAGATTGCAATTGGTTAAGGATGGGGAGGCCAAAGCTTTTAAGAGCATTAGATTGTTGTAGCTTTAAAGTTTAA 1320 0.4295 MKCFSFYFGEKKDGHKSLQSILSRFNSSTYVEAEMRRSGSELNSMDASDNSTDSLRRSSFPSLSQRPSNLRVFTVSELKTATKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTKIEVAVKQLGRRGIQARFCFAFYGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLPWNRRLKIAQDAARGLAYLHEEMDFQIIFRDFKSSNILLDEQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKIDVWSYGVFLYELITGRHPIDRNRPKGEQKLLEWVRPYLSDRRKFQLILDPRLERKHILKSAQKLAIIANRCLVKNPKNRPKMSEVLDMVTQVVESTVSTNQQPPLKSVAASAEASQGTKVKNKKVTMDQNPDCNWLRMGRPKLLRALDCCSFKV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00523 439 CDD STKc_IRAK 91 376 - -
Gma10g00523 439 Gene3D Phosphorylase Kinase; domain 1 59 178 - -
Gma10g00523 439 Gene3D Transferase(Phosphotransferase) domain 1 179 399 - -
Gma10g00523 439 Pfam Protein kinase domain 87 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma10g00523 439 MobiDBLite consensus disorder prediction 41 64 - -
Gma10g00523 439 PANTHER KINASE 1B 17 417 - -
Gma10g00523 439 MobiDBLite consensus disorder prediction 385 405 - -
Gma10g00523 439 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Gma10g00523 439 MobiDBLite consensus disorder prediction 40 64 - -
Gma10g00523 439 PANTHER OS01G0588500 PROTEIN-RELATED 17 417 - -
Gma10g00523 439 SUPERFAMILY Protein kinase-like (PK-like) 59 374 IPR011009 -
Gma10g00523 439 ProSiteProfiles Protein kinase domain profile. 85 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00523 Gma-Chr10 5327969 5330889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00523 1 411 Glycoside Hydrolase AT3G07070 40.141 7.08e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma10g00523 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00523 - - gmx:100817276 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00523 10 5327969 5330889 Gma10g00523 10 5327969 5330889 ECH
Gma10g00523 10 5327969 5330889 Gma13g01235 13 26632699 26636753 GST
Gma19g01727 19 46576215 46580568 Gma10g00523 10 5327969 5330889 PCT
Gma03g01679 03 42911232 42914300 Gma10g00523 10 5327969 5330889 PCT