Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00521 ATGACCTCACAAGTTGTCCTACACAACAATTTCGAAACCCAACCCTCCGTCACCGTCACCACCGCCACCAACACCGAGTCTCCACCCACCGCGCCACCGTCACTCGCCGTCGTCAAGAGACCCTCCACCAAGGACCGCCACACCAAGGTAAACGGCCGCGGCCGCCGCATCCGCATGCCACCGCTCTGCGCCGCGCGCATTTTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGCGAGACGATCGAGTGGCTCCTCCGCCACGCCGAGCCCTCCATCATCGCCGCCACCGGCTCCGGCACCGTCCCCGCCGCCCCCGTCTCCTCCGTTGCGCCCTCCGCTCCCTCCTCCGAGCCCATGGTCGCCTGCCCCGTCACGGCGGTTGGCGCTCAGGGAATGTTCGCCATGGCGCCGCCGCAGCCGCAGCCGAATTGCCGACTCGACCTCTCTCCGCCGGCGGGGTTGGAATTCGCGGTGAATGGTTACCGGCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGGCGACGGCGGAGGATAATCAGAACGACGAGTCTCTCGGCGAACAATGA 573 0.6754 MTSQVVLHNNFETQPSVTVTTATNTESPPTAPPSLAVVKRPSTKDRHTKVNGRGRRIRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPAAPVSSVAPSAPSSEPMVACPVTAVGAQGMFAMAPPQPQPNCRLDLSPPAGLEFAVNGYRHMPFTALLLQPATAEDNQNDESLGEQ 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00521 190 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 21 117 - -
Gma10g00521 190 ProSiteProfiles TCP domain profile. 43 97 IPR017887 -
Gma10g00521 190 MobiDBLite consensus disorder prediction 1 31 - -
Gma10g00521 190 MobiDBLite consensus disorder prediction 1 34 - -
Gma10g00521 190 Pfam TCP family transcription factor 42 119 IPR017887 -
Gma10g00521 190 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 117 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00521 Gma-Chr10 5309614 5310450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00521 43 177 TCP Transcription Factor Family AT2G37000 58.519 1.51e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma10g00521 TCP 2.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00521 - - gmx:100779699 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00521 10 5309614 5310450 Gma10g00521 10 5309614 5310450 ECH
Gma10g00521 10 5309614 5310450 Gma13g01230 13 26608420 26609127 GST