Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00514 ATGCTAATTAGGTCTTTTGTTGGGAAGATAGAAAAGGGTGTTTCACACTTTGTTCACAGAAGGCCCCCATTGAATGATCACTTCAACGAAGCCACAAGTGTGCTGCCAGATGATGTTATGGAAGGATATTTTGCTGTACTTGCAATAAAGGATGGAGAATCCAAAAGGTTCATTGTTGGCTTACATTACTTGAACGATCCTGCTTTCATTGAATTGCTAGATCAAGCTCAGGAGGAGTTTGGTTTCAGACAACAAGGAACTCTTATTGTTCCTTGTCAGCCACAAGAATTACAAAAGATTTTAGATGGTCGGAGTTGGAGAGCATAG 327 0.4037 MLIRSFVGKIEKGVSHFVHRRPPLNDHFNEATSVLPDDVMEGYFAVLAIKDGESKRFIVGLHYLNDPAFIELLDQAQEEFGFRQQGTLIVPCQPQELQKILDGRSWRA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00514 108 Pfam Auxin responsive protein 33 101 IPR003676 GO:0009733
Gma10g00514 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 104 - -
Gma10g00514 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00514 Gma-Chr10 5217363 5217689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00514 36 101 Calmodulin-binding Proteins AT3G43120 37.879 2.17e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00514 - K14488 gmx:100776513 223.016