Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00506 ATGGGAGGAAAATGTCCGCACAGGAACGTGAAGAAGAGAAGATATTCTCACAAGACCGCGCGGCGAACCAAATTTGAGCTGAAAGGGGACGACATGGTTTATGCGCAGCTCAACAAACCCGATCAAGAGAGACCCCCTTTACCCGTCGACGAAGATTTGCCTGGGATGGGCCAGTACTATTGCCTTCACTGCGATCGGTACTTTGCCAATATAACTGTGAGGGATGAGCACTTTAAGACCAAACGACACAAGAAGCGTATAAAACAAATGATGGGTCCTGCACCACATACTCAACTTGATGCCGATTTAGCTTCTGGGATGGGTATGCCAGACAATGGACCAAAGCTAATGTCTATGTAA 360 0.475 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDQERPPLPVDEDLPGMGQYYCLHCDRYFANITVRDEHFKTKRHKKRIKQMMGPAPHTQLDADLASGMGMPDNGPKLMSM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00506 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Gma10g00506 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Gma10g00506 119 MobiDBLite consensus disorder prediction 83 119 - -
Gma10g00506 119 MobiDBLite consensus disorder prediction 1 20 - -
Gma10g00506 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 109 IPR036236 -
Gma10g00506 119 Gene3D Classic Zinc Finger 45 109 - -
Gma10g00506 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Gma10g00506 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00506 Gma-Chr10 5096818 5098944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma10g00506 3 118 C2H2 Transcription Factor Family AT2G36930 75.862 5.07e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00506 K14821 - gmx:100527632 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00506 10 5096818 5098944 Gma10g00506 10 5096818 5098944 ECH